RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 KLHDC7AQ5VTJ3 777 aa33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 DPY19L2P1Q6NXN4 242 aa33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 SV2AQ7L0J3 742 aa33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 CACNA2D4Q7Z3S7 1137 aa33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 CD302Q8IX05 232 aa33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 FBXL13Q8NEE6 735 aa33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 CCDC94Q9BW85 323 aaPredicted RBP33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 GANQ9H2C0 597 aa33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 TFRCP02786 760 aaKnown RBP33.59■■■□□ 2.97
CAPNS1-206ENST00000588815 ZACNQ401N2 412 aa33.59■■■□□ 2.97
CAPNS1-206ENST00000588815 CEP120Q8N960 986 aa33.59■■■□□ 2.97
CAPNS1-206ENST00000588815 ACAP3Q96P50 834 aa33.59■■■□□ 2.97
CAPNS1-206ENST00000588815 POP1Q99575 1024 aaKnown RBP33.59■■■□□ 2.97
CAPNS1-206ENST00000588815 TRPV6Q9H1D0 765 aa33.59■■■□□ 2.97
CAPNS1-206ENST00000588815 MYO6Q9UM54 1294 aa33.59■■■□□ 2.97
CAPNS1-206ENST00000588815 FECHP22830 423 aa33.58■■■□□ 2.97
CAPNS1-206ENST00000588815 FBXO47Q5MNV8 452 aa33.58■■■□□ 2.97
CAPNS1-206ENST00000588815 FAM126BQ8IXS8 530 aa33.58■■■□□ 2.97
CAPNS1-206ENST00000588815 LMO3Q8TAP4 145 aa33.58■■■□□ 2.97
CAPNS1-206ENST00000588815 ZNF830Q96NB3 372 aaPredicted RBP33.58■■■□□ 2.97
CAPNS1-206ENST00000588815 TRIM6Q9C030 488 aaPredicted RBP33.58■■■□□ 2.97
CAPNS1-206ENST00000588815 INTS2Q9H0H0 1204 aaKnown RBP33.58■■■□□ 2.97
CAPNS1-206ENST00000588815 NPTXRO95502 500 aa33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 C4BPAP04003 597 aaKnown RBP33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 UCHL3P15374 230 aa33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 CCZ1BP86790 482 aa33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 CCZ1P86791 482 aaPredicted RBP33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 LRMPQ12912 555 aa33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 FAM43BQ6ZT52 329 aaPredicted RBP33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 NT5DC4Q86YG4 428 aa33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 BAG1Q99933 345 aaPredicted RBP33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 PLEKHA5Q9HAU0 1116 aa33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 SIX2Q9NPC8 291 aa33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 ST3GAL5Q9UNP4 418 aa33.57■■■□□ 2.97
CAPNS1-206ENST00000588815 RNF225M0QZC1 329 aaPredicted RBP33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 EPHB6O15197 1021 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 TLR3O15455 904 aaKnown RBP33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 ZC3H11AO75152 810 aaKnown RBP eCLIP33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 CKBP12277 381 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 GJA8P48165 433 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 ZSCAN30Q86W11 494 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 ZNF516Q92618 1163 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 APEX2Q9UBZ4 518 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 CD4P01730 458 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 SKILP12757 684 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 HNRNPH3P31942 346 aaKnown RBP33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 WNT7BP56706 349 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 POLR2FP61218 127 aaKnown RBP33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 OSTNP61366 133 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 BFSP2Q13515 415 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 DUOXA2Q1HG44 320 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 ZNF618Q5T7W0 954 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 C1orf53Q5VUE5 145 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 BAP1Q92560 729 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 SYN2Q92777 582 aaPredicted RBP33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 TOPORSQ9NS56 1045 aaPredicted RBP33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 ZNHIT6Q9NWK9 470 aaKnown RBP33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 RAB20Q9NX57 234 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 PLAGL2Q9UPG8 496 aa33.56■■■□□ 2.96
CAPNS1-206ENST00000588815 CXCL8P10145 99 aa33.55■■■□□ 2.96
CAPNS1-206ENST00000588815 GOLGA8FQ08AF8 430 aa33.55■■■□□ 2.96
CAPNS1-206ENST00000588815 GOLGA8DPQ0D2H9 430 aa33.55■■■□□ 2.96
CAPNS1-206ENST00000588815 FMNL3Q8IVF7 1028 aa33.55■■■□□ 2.96
CAPNS1-206ENST00000588815 FAM81BQ96LP2 452 aa33.55■■■□□ 2.96
CAPNS1-206ENST00000588815 TSPAN18Q96SJ8 248 aa33.55■■■□□ 2.96
CAPNS1-206ENST00000588815 TANC1Q9C0D5 1861 aa33.55■■■□□ 2.96
CAPNS1-206ENST00000588815 ACTN1P12814 892 aa33.54■■■□□ 2.96
CAPNS1-206ENST00000588815 KCNJ6P48051 423 aa33.54■■■□□ 2.96
CAPNS1-206ENST00000588815 YARSP54577 528 aaKnown RBP33.54■■■□□ 2.96
CAPNS1-206ENST00000588815 TMEM139Q8IV31 216 aa33.54■■■□□ 2.96
CAPNS1-206ENST00000588815 FAM212AQ96EL1 285 aa33.54■■■□□ 2.96
CAPNS1-206ENST00000588815 ERVK-5Q9HDB9 667 aa33.54■■■□□ 2.96
CAPNS1-206ENST00000588815 MNX1P50219 401 aaPredicted RBP33.53■■■□□ 2.96
CAPNS1-206ENST00000588815 PAK2Q13177 524 aa33.53■■■□□ 2.96
CAPNS1-206ENST00000588815 SLC10A6Q3KNW5 377 aa33.53■■■□□ 2.96
CAPNS1-206ENST00000588815 TMTC1Q8IUR5 882 aa33.53■■■□□ 2.96
CAPNS1-206ENST00000588815 TMEM192Q8IY95 271 aa33.53■■■□□ 2.96
CAPNS1-206ENST00000588815 ANKRD36BP1Q96IX9 119 aa33.53■■■□□ 2.96
CAPNS1-206ENST00000588815 EIF2AQ9BY44 585 aaKnown RBP33.53■■■□□ 2.96
CAPNS1-206ENST00000588815 ARHGAP6O43182 974 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 CDK17Q00537 523 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 NFX1Q12986 1120 aaKnown RBP33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 MEA1Q16626 185 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 UBXN11Q5T124 520 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 TDRD10Q5VZ19 366 aaKnown RBP33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 TWF2Q6IBS0 349 aaKnown RBP33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 PDXDC1Q6P996 788 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 SLC39A5Q6ZMH5 540 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 ANKRD33Q7Z3H0 272 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 TAS1R2Q8TE23 839 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 TOX2Q96NM4 488 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 TRAIPQ9BWF2 469 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 NLRC4Q9NPP4 1024 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 PADI3Q9ULW8 664 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 DERAQ9Y315 318 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 C2CD2Q9Y426 696 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 PTPRJQ12913 1337 aa33.52■■■□□ 2.96
CAPNS1-206ENST00000588815 TULP1O00294 542 aaPredicted RBP33.51■■■□□ 2.96
CAPNS1-206ENST00000588815 PITPNM1O00562 1244 aa33.51■■■□□ 2.96
CAPNS1-206ENST00000588815 TNNC2P02585 160 aa33.51■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms