RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 SNX33Q8WV41 574 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 MUL1Q969V5 352 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 UBXN10Q96LJ8 280 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 PDCD2LQ9BRP1 358 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 TMEM120AQ9BXJ8 343 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 SEMA6BQ9H3T3 888 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 DLL4Q9NR61 685 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 SAE1Q9UBE0 346 aaPredicted RBP9.07□□□□□ -0.96
VMP1-208ENST00000588617 GOLGA6L3A6NEY3 463 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 J3KRW8 73 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 NCAM2O15394 837 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 RHOBTB3O94955 611 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 FSBPO95073 299 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 FGFR2P21802 821 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 GDNFP39905 211 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 MAPKAPK2P49137 400 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 GALNT1Q10472 559 aaPredicted RBP9.06□□□□□ -0.96
VMP1-208ENST00000588617 NKAPLQ5M9Q1 402 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 PHF19Q5T6S3 580 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 XP32Q5T750 250 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 SLC23A3Q6PIS1 610 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 DPP8Q6V1X1 898 aaPredicted RBP9.06□□□□□ -0.96
VMP1-208ENST00000588617 KRBA2Q6ZNG9 492 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 PPP1R3BQ86XI6 285 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 PQLC1Q8N2U9 271 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 DTX3Q8N9I9 347 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 NAXEQ8NCW5 288 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 CYFIP2Q96F07 1278 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 PPM1MQ96MI6 270 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 STK33Q9BYT3 514 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 OSBPL6Q9BZF3 934 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 MAGEH1Q9H213 219 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 LDAHQ9H6V9 325 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 C19orf73Q9NVV2 129 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 COL20A1Q9P218 1284 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 MYO1AQ9UBC5 1043 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 SLC39A10Q9ULF5 831 aa9.06□□□□□ -0.96
VMP1-208ENST00000588617 N4BP3O15049 544 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 IL18BPO95998 194 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 FTH1P19P0C7X4 201 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 POSTNQ15063 836 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 MST1LQ2TV78 715 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 HYIQ5T013 277 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 ZC3H14Q6PJT7 736 aaKnown RBP9.05□□□□□ -0.96
VMP1-208ENST00000588617 WFDC3Q8IUB2 231 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 IQCDQ96DY2 449 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 ZSCAN31Q96LW9 406 aaPredicted RBP9.05□□□□□ -0.96
VMP1-208ENST00000588617 WDR92Q96MX6 357 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 P2RX7Q99572 595 aaKnown RBP9.05□□□□□ -0.96
VMP1-208ENST00000588617 INO80BQ9C086 356 aaPredicted RBP9.05□□□□□ -0.96
VMP1-208ENST00000588617 OBP2BQ9NPH6 170 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 SERHLQ9NQF3 203 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 DACT1Q9NYF0 836 aa9.05□□□□□ -0.96
VMP1-208ENST00000588617 A0A1B0GVC2 190 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 RRN3P2A6NIE6 340 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 AMY1AP04745 511 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 HNRNPLP14866 589 aaKnown RBP eCLIP9.04□□□□□ -0.96
VMP1-208ENST00000588617 ARL4CP56559 192 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 RPS16P62249 146 aaKnown RBP9.04□□□□□ -0.96
VMP1-208ENST00000588617 TAF5Q15542 800 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 TAF12Q16514 161 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 WDR72Q3MJ13 1102 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 PLEKHN1Q494U1 663 aaPredicted RBP9.04□□□□□ -0.96
VMP1-208ENST00000588617 C19orf54Q5BKX5 351 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 ADGRF1Q5T601 910 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 RSRC2Q7L4I2 434 aaKnown RBP9.04□□□□□ -0.96
VMP1-208ENST00000588617 BEND5Q7L4P6 421 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 CXXC5Q7LFL8 322 aaKnown RBP9.04□□□□□ -0.96
VMP1-208ENST00000588617 ZGPATQ8N5A5 531 aaKnown RBP9.04□□□□□ -0.96
VMP1-208ENST00000588617 C18orf8Q96DM3 657 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 NEUROD6Q96NK8 337 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 HEPHQ9BQS7 1158 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 SORBS1Q9BX66 1292 aaKnown RBP9.04□□□□□ -0.96
VMP1-208ENST00000588617 BCO1Q9HAY6 547 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 PDP2Q9P2J9 529 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 ZFP69BQ9UJL9 534 aa9.04□□□□□ -0.96
VMP1-208ENST00000588617 EIF3FO00303 357 aaPredicted RBP9.03□□□□□ -0.96
VMP1-208ENST00000588617 CNOT4O95628 575 aaKnown RBP9.03□□□□□ -0.96
VMP1-208ENST00000588617 AHSGP02765 367 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 GAAP10253 952 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 DDCP20711 480 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 PRDX5P30044 214 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 SREBF1P36956 1147 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 ADCY8P40145 1251 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 ITGA8P53708 1063 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 HTRA4P83105 476 aaPredicted RBP9.03□□□□□ -0.96
VMP1-208ENST00000588617 G3BP1Q13283 466 aaKnown RBP eCLIP9.03□□□□□ -0.96
VMP1-208ENST00000588617 OTOP2Q7RTS6 562 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 STPG3Q8N7X2 389 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 OR6B3Q8NGW1 331 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 ZNF480Q8WV37 535 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 KBTBD7Q8WVZ9 684 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 NMD3Q96D46 503 aaKnown RBP9.03□□□□□ -0.96
VMP1-208ENST00000588617 TRIM54Q9BYV2 358 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 MRPL46Q9H2W6 279 aaKnown RBP9.03□□□□□ -0.96
VMP1-208ENST00000588617 CNTD2Q9H8S5 307 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 NRBP1Q9UHY1 535 aa9.03□□□□□ -0.96
VMP1-208ENST00000588617 LGALS16A8MUM7 142 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 NT5C1B-RDH14C9J2C7 533 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 H0Y858 1186 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms