RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CBWD3Q5JTY5 395 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 CBWD5Q5RIA9 395 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 C1orf220Q5T0J3 134 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 TRIM65Q6PJ69 517 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 CD302Q8IX05 232 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 THNSL1Q8IYQ7 743 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 FBXL13Q8NEE6 735 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 PLEKHO2Q8TD55 490 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 BAP1Q92560 729 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 CGRRF1Q99675 332 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 STK33Q9BYT3 514 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 HAPLN2Q9GZV7 340 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 CDT1Q9H211 546 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 GANQ9H2C0 597 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 NLRC4Q9NPP4 1024 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 AIPL1Q9NZN9 384 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 ZSWIM8A7E2V4 1837 aa11.37□□□□□ -0.59
CHMP1B-202ENST00000588284 KBTBD13C9JR72 458 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 B4GALT5O43286 388 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 TSPAN1O60635 241 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 PHACTR2O75167 634 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 IPO7O95373 1038 aaKnown RBP11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 C4BPAP04003 597 aaKnown RBP11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 SERPING1P05155 500 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 EDN1P05305 212 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 IQCF3P0C7M6 154 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 FERP16591 822 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 KRT83P78385 493 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 MRPS6P82932 125 aaKnown RBP11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 PTK7Q13308 1070 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 HIC1Q14526 733 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 SNX17Q15036 470 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 DUOXA2Q1HG44 320 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 WDR44Q5JSH3 913 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 EEF1DP3Q658K8 133 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 GDF6Q6KF10 455 aaPredicted RBP11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 DPY19L2P1Q6NXN4 242 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 NOTUMQ6P988 496 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 SLC27A1Q6PCB7 646 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 SV2AQ7L0J3 742 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 ENOSF1Q7L5Y1 443 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 SERINC5Q86VE9 423 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 WDR49Q8IV35 697 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 LMO3Q8TAP4 145 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 CCDC42Q96M95 316 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 ACAP3Q96P50 834 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 TSPAN18Q96SJ8 248 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 PPP1R16BQ96T49 567 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 OSMRQ99650 979 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 CCDC94Q9BW85 323 aaPredicted RBP11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 PDZD7Q9H5P4 517 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 ASB7Q9H672 318 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 PDE11AQ9HCR9 933 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 SIX2Q9NPC8 291 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 SPTLC3Q9NUV7 552 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 RAB20Q9NX57 234 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 APEX2Q9UBZ4 518 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 DNAJC12Q9UKB3 198 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 NOD1Q9Y239 953 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 GINS2Q9Y248 185 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 TRPV2Q9Y5S1 764 aa11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 EPN1Q9Y6I3 576 aaPredicted RBP11.36□□□□□ -0.59
CHMP1B-202ENST00000588284 SIP14410 1827 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 SSU72P8A0A1W2PR75 194 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 LRRC53A6NM62 1247 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 EPHB6O15197 1021 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 FAM189A1O60320 539 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 B4GALT4O60513 344 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 CAND2O75155 1236 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 CSDE1O75534 798 aaKnown RBP11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 TNNC2P02585 160 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 CCDC175P0C221 793 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 STAG3L1P0CL83 205 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 ACTN1P12814 892 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 ANXA13P27216 316 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 MFAP3P55082 362 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 TMEM62Q0P6H9 643 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 ASIC2Q16515 512 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 PTGISQ16647 500 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 ZACNQ401N2 412 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 WDR59Q6PJI9 974 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 C15orf39Q6ZRI6 1047 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 FAM43BQ6ZT52 329 aaPredicted RBP11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 NT5DC4Q86YG4 428 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 CCAR2Q8N163 923 aaKnown RBP11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 TXLNBQ8N3L3 684 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 NT5C1BQ96P26 610 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 POP1Q99575 1024 aaKnown RBP11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 CHP1Q99653 195 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 PLEKHA5Q9HAU0 1116 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 CDHR5Q9HBB8 845 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 UBE2TQ9NPD8 197 aaPredicted RBP11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 SQORQ9Y6N5 450 aa11.35□□□□□ -0.59
CHMP1B-202ENST00000588284 A0A0U1RQG5 324 aaPredicted RBP11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 EIF3CLB5ME19 914 aaKnown RBP11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 KIF2AO00139 706 aaPredicted RBP11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 GPR182O15218 404 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 OFD1O75665 1012 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 HOXA11P31270 313 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms