RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PSMD5Q16401 504 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 NPAS3Q8IXF0 933 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 HACE1Q8IYU2 909 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 NELL1Q92832 810 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 TMEM60Q9H2L4 133 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 TTC12Q9H892 705 aaPredicted RBP15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 HCFC1R1Q9NWW0 138 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 PARP2Q9UGN5 583 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 PCDHA12Q9UN75 941 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 USP20Q9Y2K6 914 aa15.28■□□□□ 0.04
CLPTM1-208ENST00000588274 KMT2BQ9UMN6 2715 aaPredicted RBP15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 KANSL1LA0AUZ9 987 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 TADA2AO75478 443 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 MLF2Q15773 248 aaPredicted RBP15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 CALCRLQ16602 461 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 ZNF528Q3MIS6 628 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 FAM171A1Q5VUB5 890 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 EEF1DP3Q658K8 133 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 ZNF687Q8N1G0 1237 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 C3orf58Q8NDZ4 430 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 SLC7A14Q8TBB6 771 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 RUBCNQ92622 972 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 PRMT7Q9NVM4 692 aaPredicted RBP15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 SNTG2Q9NY99 539 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 ORC3Q9UBD5 711 aaPredicted RBP15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 MTRRQ9UBK8 725 aa15.27■□□□□ 0.04
CLPTM1-208ENST00000588274 EPG5Q9HCE0 2579 aa15.27■□□□□ 0.03
CLPTM1-208ENST00000588274 LRRIQ4A6NIV6 560 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 TMEM189-UBE2V1I3L0A0 370 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 NRG2O14511 850 aaPredicted RBP15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 CCL16O15467 120 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 NEMFO60524 1076 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 MED24O75448 989 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 FGFR3P22607 806 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 KRT2P35908 639 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 NCBP1Q09161 790 aaKnown RBP15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 ST3GAL1Q11201 340 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 FZD5Q13467 585 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 SNW1Q13573 536 aaKnown RBP15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 RAB33AQ14088 237 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 SLC5A9Q2M3M2 681 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 ZC3H14Q6PJT7 736 aaKnown RBP15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 KCNG4Q8TDN1 519 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 KXD1Q9BQD3 176 aa15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 DNMT3BQ9UBC3 853 aaKnown RBP15.26■□□□□ 0.03
CLPTM1-208ENST00000588274 BTBD18B2RXH4 712 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 BAG4O95429 457 aaKnown RBP15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 XRCC6P12956 609 aaKnown RBP eCLIP15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 XBP1P17861 261 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 RFX1P22670 979 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 FCARP24071 287 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 TXKP42681 527 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 PRKCQQ04759 706 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 PPM1LQ5SGD2 360 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 LIN9Q5TKA1 542 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 MTSS1LQ765P7 747 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 CATSPER3Q86XQ3 398 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 NOSTRINQ8IVI9 506 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 ZBTB44Q8NCP5 570 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 NSUN7Q8NE18 718 aaKnown RBP15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 CLDN23Q96B33 292 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 DDX27Q96GQ7 796 aaKnown RBP15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 PPP1R10Q96QC0 940 aaKnown RBP15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 OSBPL6Q9BZF3 934 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 LTB4R2Q9NPC1 389 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 FBXO4Q9UKT5 387 aa15.25■□□□□ 0.03
CLPTM1-208ENST00000588274 N4BP3O15049 544 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 MARCH6O60337 910 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 LILRB5O75023 590 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 THP07101 528 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 CD72P21854 359 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 SOX4Q06945 474 aaPredicted RBP15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 ME3Q16798 604 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 SLC44A4Q53GD3 710 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 AXDND1Q5T1B0 1012 aaPredicted RBP15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 MAEAQ7L5Y9 396 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 DGLUCYQ7Z3D6 616 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 CEP57Q86XR8 500 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 DIS3L2Q8IYB7 885 aaKnown RBP15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 MCPH1Q8NEM0 835 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 GTF3C6Q969F1 213 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 KIFC3Q9BVG8 833 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 PLA2G2FQ9BZM2 168 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 PRMT8Q9NR22 394 aaPredicted RBP15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 KCNH3Q9ULD8 1083 aa15.24■□□□□ 0.03
CLPTM1-208ENST00000588274 ACKR2O00590 384 aa15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 MEFVO15553 781 aaPredicted RBP15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 JAK2O60674 1132 aa15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 TDGF1P13385 188 aa15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 TARSP26639 723 aaKnown RBP15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 OR1D2P34982 312 aa15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 RBM25P49756 843 aaKnown RBP15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 ELAVL2Q12926 359 aaKnown RBP15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 PRPF4BQ13523 1007 aaKnown RBP15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 PUM1Q14671 1186 aaKnown RBP eCLIP15.23■□□□□ 0.033e-7■□□□□ 9.7
CLPTM1-208ENST00000588274 PABPC1LQ4VXU2 614 aaKnown RBP15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 GLRA4Q5JXX5 417 aa15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 NECAB1Q8N987 351 aa15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 ING5Q8WYH8 240 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms