RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 CXCL9Q07325 125 aa21.23■□□□□ 0.99
MBD1-216ENST00000587605 SIX1Q15475 284 aaPredicted RBP21.23■□□□□ 0.99
MBD1-216ENST00000587605 CIAPIN1Q6FI81 312 aa21.23■□□□□ 0.99
MBD1-216ENST00000587605 PPP1R2P3Q6NXS1 205 aa21.23■□□□□ 0.99
MBD1-216ENST00000587605 SV2AQ7L0J3 742 aa21.23■□□□□ 0.99
MBD1-216ENST00000587605 TRMT10CQ7L0Y3 403 aaKnown RBP21.23■□□□□ 0.99
MBD1-216ENST00000587605 PSPC1Q8WXF1 523 aaKnown RBP21.23■□□□□ 0.99
MBD1-216ENST00000587605 RNF25Q96BH1 459 aaPredicted RBP21.23■□□□□ 0.99
MBD1-216ENST00000587605 IFT74Q96LB3 600 aa21.23■□□□□ 0.99
MBD1-216ENST00000587605 TEPSINQ96N21 525 aa21.23■□□□□ 0.99
MBD1-216ENST00000587605 RPAP3Q9H6T3 665 aaPredicted RBP21.23■□□□□ 0.99
MBD1-216ENST00000587605 ACTR5Q9H9F9 607 aaPredicted RBP21.23■□□□□ 0.99
MBD1-216ENST00000587605 C1orf112Q9NSG2 853 aa21.23■□□□□ 0.99
MBD1-216ENST00000587605 VWA5AO00534 786 aa21.22■□□□□ 0.99
MBD1-216ENST00000587605 RGS16O15492 202 aaPredicted RBP21.22■□□□□ 0.99
MBD1-216ENST00000587605 ATMINO43313 823 aaPredicted RBP21.22■□□□□ 0.99
MBD1-216ENST00000587605 STAM2O75886 525 aa21.22■□□□□ 0.99
MBD1-216ENST00000587605 RARAP10276 462 aa21.22■□□□□ 0.99
MBD1-216ENST00000587605 TMOD1P28289 359 aa21.22■□□□□ 0.99
MBD1-216ENST00000587605 CALCOCO2Q13137 446 aa21.22■□□□□ 0.99
MBD1-216ENST00000587605 SLC39A4Q6P5W5 647 aa21.22■□□□□ 0.99
MBD1-216ENST00000587605 NSMFQ6X4W1 530 aa21.22■□□□□ 0.99
MBD1-216ENST00000587605 CNPY4Q8N129 248 aa21.22■□□□□ 0.99
MBD1-216ENST00000587605 ROPN1BQ9BZX4 212 aaPredicted RBP21.22■□□□□ 0.99
MBD1-216ENST00000587605 ROPN1Q9HAT0 212 aaPredicted RBP21.22■□□□□ 0.99
MBD1-216ENST00000587605 RNF146Q9NTX7 359 aa21.22■□□□□ 0.99
MBD1-216ENST00000587605 PARP14Q460N5 1801 aa21.22■□□□□ 0.99
MBD1-216ENST00000587605 ZNFX1Q9P2E3 1918 aaKnown RBP21.22■□□□□ 0.99
MBD1-216ENST00000587605 GRIN3BO60391 1043 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 MMP13P45452 471 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 ERMARDQ5T6L9 678 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 MMS22LQ6ZRQ5 1243 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 ZDHHC14Q8IZN3 488 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 CACNA2D3Q8IZS8 1091 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 GRK7Q8WTQ7 553 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 TATDN2Q93075 761 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 XPO6Q96QU8 1125 aaKnown RBP21.21■□□□□ 0.99
MBD1-216ENST00000587605 SH2D3AQ9BRG2 576 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 ATP6V0A4Q9HBG4 840 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 PDLIM7Q9NR12 457 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 GABBR1Q9UBS5 961 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.21■□□□□ 0.99
MBD1-216ENST00000587605 HNRNPDLO14979 420 aaKnown RBP21.21■□□□□ 0.99
MBD1-216ENST00000587605 EXTL3O43909 919 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 NR3C2P08235 984 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 KRT5P13647 590 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 MAPK4P31152 587 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 ZNF280AP59817 542 aaPredicted RBP21.21■□□□□ 0.99
MBD1-216ENST00000587605 CLDN10P78369 228 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 PTP4A2Q12974 167 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 GKAP1Q5VSY0 366 aaPredicted RBP21.21■□□□□ 0.99
MBD1-216ENST00000587605 C15orf39Q6ZRI6 1047 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 CCDC121Q6ZUS5 278 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 SUGP1Q8IWZ8 645 aaKnown RBP21.21■□□□□ 0.99
MBD1-216ENST00000587605 NSUN6Q8TEA1 469 aaKnown RBP21.21■□□□□ 0.99
MBD1-216ENST00000587605 BSNDQ8WZ55 320 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 HOMER3Q9NSC5 361 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 DDX20Q9UHI6 824 aaKnown RBP21.21■□□□□ 0.99
MBD1-216ENST00000587605 PCDHB2Q9Y5E7 798 aa21.21■□□□□ 0.99
MBD1-216ENST00000587605 STBD1O95210 358 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 SHBGP04278 402 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 CAV1Q03135 178 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 MTMR2Q13614 643 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 SLC29A2Q14542 456 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 PPP1R7Q15435 360 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 WDR44Q5JSH3 913 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 MFSD5Q6N075 450 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 TRIM72Q6ZMU5 477 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 KIFC3Q9BVG8 833 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 ARHGAP28Q9P2N2 729 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 DOCK1Q14185 1865 aa21.2■□□□□ 0.98
MBD1-216ENST00000587605 DCDC2CA8MYV0 355 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 RIPK2O43353 540 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 UNGP13051 313 aaPredicted RBP21.19■□□□□ 0.98
MBD1-216ENST00000587605 KCNA2P16389 499 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 RPS12P25398 132 aaKnown RBP21.19■□□□□ 0.98
MBD1-216ENST00000587605 BAATQ14032 418 aaPredicted RBP21.19■□□□□ 0.98
MBD1-216ENST00000587605 PSMD6Q15008 389 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 SGO2Q562F6 1265 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 RNF187Q5TA31 235 aaPredicted RBP21.19■□□□□ 0.98
MBD1-216ENST00000587605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.19■□□□□ 0.98
MBD1-216ENST00000587605 TAX1BP1Q86VP1 789 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 MCOLN2Q8IZK6 566 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 CHMP6Q96FZ7 201 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 BICD1Q96G01 975 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 CEP89Q96ST8 783 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 POP1Q99575 1024 aaKnown RBP21.19■□□□□ 0.98
MBD1-216ENST00000587605 AS3MTQ9HBK9 375 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 TOPORSQ9NS56 1045 aaPredicted RBP21.19■□□□□ 0.98
MBD1-216ENST00000587605 ANAPC7Q9UJX3 599 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 CAPN7Q9Y6W3 813 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 DLATP10515 647 aaKnown RBP21.19■□□□□ 0.98
MBD1-216ENST00000587605 ITIH2P19823 946 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 ACTN3Q08043 901 aaPredicted RBP21.19■□□□□ 0.98
MBD1-216ENST00000587605 IFT88Q13099 833 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 TAOK1Q7L7X3 1001 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 SEC16BQ96JE7 1060 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 BTBD6Q96KE9 485 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 CCDC134Q9H6E4 229 aa21.19■□□□□ 0.98
MBD1-216ENST00000587605 H0YHG0 523 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms