RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 SH2D3AQ9BRG2 576 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 AGO4Q9HCK5 861 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 COL20A1Q9P218 1284 aa18.06■□□□□ 0.48
PRKCSH-205ENST00000587327 FSCN2O14926 492 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 TP73O15350 636 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 ADSSP30520 456 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 NCKAP1LP55160 1127 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 SNCBQ16143 134 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 CCDC25Q86WR0 208 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 CCDC50Q8IVM0 306 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 IL31RAQ8NI17 732 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 HELQQ8TDG4 1101 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 MTFR1LQ9H019 292 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 SAMD15Q9P1V8 674 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 COQ4Q9Y3A0 265 aa18.05■□□□□ 0.48
PRKCSH-205ENST00000587327 CLDN3O15551 220 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 ICAM1P05362 532 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 PDE6CP51160 858 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 GPC3P51654 580 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 TGFB2P61812 414 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 SPP2Q13103 211 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 CNGA2Q16280 664 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 TKFCQ3LXA3 575 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 PARD3BQ8TEW8 1205 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 CCDC127Q96BQ5 260 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 POP1Q99575 1024 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 TIPINQ9BVW5 301 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 PLVAPQ9BX97 442 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 GPRC5CQ9NQ84 441 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 WHRNQ9P202 907 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 CCPG1Q9ULG6 757 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 NFKBIEO00221 500 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 GRIN3BO60391 1043 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 ZBTB7AO95365 584 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 VIMP08670 466 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 RDXP35241 583 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 ZNF280AP59817 542 aaPredicted RBP18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 DALRD3Q5D0E6 543 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 ACAD10Q6JQN1 1059 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 EXOC3L1Q86VI1 746 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 JDP2Q8WYK2 163 aa18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 DDX1Q92499 740 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 ELAC2Q9BQ52 826 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 GEMIN8Q9NWZ8 242 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-205ENST00000587327 TMEM150BA6NC51 233 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 DLATP10515 647 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 DGKZQ13574 1117 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 NSMFQ6X4W1 530 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 SLC17A8Q8NDX2 589 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 KIFAP3Q92845 792 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 CCDC113Q9H0I3 377 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 CDC42EP4Q9H3Q1 356 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 TMEM8AQ9HCN3 771 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 AAASQ9NRG9 546 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 TBX20Q9UMR3 447 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 UBIAD1Q9Y5Z9 338 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 TULP1O00294 542 aaPredicted RBP18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 NFIBO00712 420 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 IFNAR2P48551 515 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 KRT17Q04695 432 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 MTMR1Q13613 665 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 CCDC38Q502W7 563 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 SGO2Q562F6 1265 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 C1orf54Q8WWF1 131 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 SAAL1Q96ER3 474 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 DDX23Q9BUQ8 820 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 HOMER3Q9NSC5 361 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 SLC12A4Q9UP95 1085 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 EXOC7Q9UPT5 735 aa18.03■□□□□ 0.48
PRKCSH-205ENST00000587327 ASTN2O75129 1339 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 WDR46O15213 610 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 GSTA1P08263 222 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 ITIH2P19823 946 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 CNGA1P29973 690 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 MRPS9P82933 396 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 LLGL1Q15334 1064 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 UGCGQ16739 394 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 LONRF1Q17RB8 773 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 TBC1D10BQ4KMP7 808 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 PCNX4Q63HM2 1172 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 RHBDF2Q6PJF5 856 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 FAM228AQ86W67 206 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 C4orf19Q8IY42 314 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 FBXL13Q8NEE6 735 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 MAGEC3Q8TD91 643 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 TAS1R2Q8TE23 839 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 CLEC4DQ8WXI8 215 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 NT5C1BQ96P26 610 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 SERPINB12Q96P63 405 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 NSRP1Q9H0G5 558 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 TBC1D22BQ9NU19 505 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 RAB20Q9NX57 234 aa18.02■□□□□ 0.48
PRKCSH-205ENST00000587327 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.02■□□□□ 0.486e-6■□□□□ 10.3
PRKCSH-205ENST00000587327 MGRN1O60291 552 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 MAP2K2P36507 400 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 FAM102BQ5T8I3 360 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 TMEM161BQ8NDZ6 487 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 TPX2Q9ULW0 747 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 ACSL3O95573 720 aa18.01■□□□□ 0.47
PRKCSH-205ENST00000587327 MKRN4PQ13434 485 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms