RNA–Protein interactions for RNA: ENST00000586940.1

RFX2-206, Transcript of regulatory factor X2, human

TSL 3

Gene RFX2, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-206	ENST00000586940	MRPS17	Q9Y2R5	130 aa	Known RBP	13.92	□□□□□ -0.18
RFX2-206	ENST00000586940	ZMYM2	Q9UBW7	1377 aa		13.92	□□□□□ -0.18
RFX2-206	ENST00000586940	STK36	Q9NRP7	1315 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	CASTOR2	A6NHX0	329 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	TBX3	O15119	743 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	CCNT1	O60563	726 aa	Known RBP	13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	CDKL5	O76039	1030 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	CD72	P21854	359 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	CYP4A11	Q02928	519 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	ELAVL2	Q12926	359 aa	Known RBP	13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	CUL4A	Q13619	759 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	CAPS	Q13938	189 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	PPP4R3A	Q6IN85	833 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	TPRG1	Q6ZUI0	275 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	CDR2L	Q86X02	465 aa	Predicted RBP	13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	TPH2	Q8IWU9	490 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	NECAB1	Q8N987	351 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	LNX1	Q8TBB1	728 aa	Predicted RBP	13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	SLC7A14	Q8TBB6	771 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	GTF3C6	Q969F1	213 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	CLSTN3	Q9BQT9	956 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	XPNPEP1	Q9NQW7	623 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	RAB23	Q9ULC3	237 aa		13.91	□□□□□ -0.18
RFX2-206	ENST00000586940	B4GALT5	O43286	388 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	LILRB5	O75023	590 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	DGAT1	O75907	488 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	BAG4	O95429	457 aa	Known RBP	13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	HSP90AA1	P07900	732 aa	Known RBP	13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	POU2F2	P09086	479 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	TARS	P26639	723 aa	Known RBP	13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	RPS9	P46781	194 aa	Known RBP	13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	ST3GAL1	Q11201	340 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	AMHR2	Q16671	573 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	TMEM132A	Q24JP5	1023 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	UVSSA	Q2YD98	709 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	PABPC1L	Q4VXU2	614 aa	Known RBP	13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	TSSK4	Q6SA08	328 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	ZNF852	Q6ZMS4	543 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	NPAS3	Q8IXF0	933 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	ASAP3	Q8TDY4	903 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	NFKBIZ	Q9BYH8	718 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	CACNG4	Q9UBN1	327 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	KCNH3	Q9ULD8	1083 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	MRPS23	Q9Y3D9	190 aa	Known RBP	13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	DCHS1	Q96JQ0	3298 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	GVINP1	Q7Z2Y8	2422 aa		13.9	□□□□□ -0.18
RFX2-206	ENST00000586940	SPTBN4	Q9H254	2564 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940		A0A1B0GUA9	196 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	DCDC2B	A2VCK2	349 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	ZBTB39	O15060	712 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	ECI2	O75521	394 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	KIF4A	O95239	1232 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	FDPS	P14324	419 aa	Known RBP	13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	XBP1	P17861	261 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	PPP2R5D	Q14738	602 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	ING5	Q8WYH8	240 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	HAS1	Q92839	578 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	CLDN23	Q96B33	292 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	INTS4	Q96HW7	963 aa	Known RBP	13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	PAAF1	Q9BRP4	392 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	GJB4	Q9NTQ9	266 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	HCFC1R1	Q9NWW0	138 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	DNMT3B	Q9UBC3	853 aa	Known RBP	13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	KCNJ14	Q9UNX9	436 aa		13.89	□□□□□ -0.19
RFX2-206	ENST00000586940	SLITRK3	O94933	977 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	TH	P07101	528 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	GLRA2	P23416	452 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	ARL2	P36404	184 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	ADCY1	Q08828	1119 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	RAB33A	Q14088	237 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	PIK3AP1	Q6ZUJ8	805 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	POTED	Q86YR6	584 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	SLFN12	Q8IYM2	578 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	NSUN7	Q8NE18	718 aa	Known RBP	13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	NELL1	Q92832	810 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	MCRS1	Q96EZ8	462 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	PRMT8	Q9NR22	394 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	ANKEF1	Q9NU02	776 aa		13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.88	□□□□□ -0.19
RFX2-206	ENST00000586940	LRRIQ4	A6NIV6	560 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	MAN2B1	O00754	1011 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	ADAM12	O43184	909 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	JAK2	O60674	1132 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	OR1D2	P34982	312 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	DDIT3	P35638	169 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	NRL	P54845	237 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	ST3GAL2	Q16842	350 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	RTL10	Q7L3V2	364 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	ZBTB8OS	Q8IWT0	167 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	DNASE1L2	Q92874	299 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	CHAMP1	Q96JM3	812 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	PRIMPOL	Q96LW4	560 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	HEBP1	Q9NRV9	189 aa		13.87	□□□□□ -0.19
RFX2-206	ENST00000586940	SNTG2	Q9NY99	539 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms