RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 BEND3Q5T5X7 828 aa5.71□□□□□ -1.5
ZNF540-204ENST00000586792 CCAR1Q8IX12 1150 aaKnown RBP5.71□□□□□ -1.5
ZNF540-204ENST00000586792 RTFDC1Q9BY42 306 aaPredicted RBP5.71□□□□□ -1.5
ZNF540-204ENST00000586792 API5Q9BZZ5 524 aaKnown RBP5.71□□□□□ -1.5
ZNF540-204ENST00000586792 ANKRD2Q9GZV1 360 aa5.71□□□□□ -1.5
ZNF540-204ENST00000586792 CNNM1Q9NRU3 951 aa5.71□□□□□ -1.5
ZNF540-204ENST00000586792 LRP2BPQ9P2M1 347 aa5.71□□□□□ -1.5
ZNF540-204ENST00000586792 DUOX1Q9NRD9 1551 aa5.71□□□□□ -1.5
ZNF540-204ENST00000586792 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 MATN2O00339 956 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 IPO8O15397 1037 aaKnown RBP5.7□□□□□ -1.5
ZNF540-204ENST00000586792 ECE2O60344 883 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 RHOBTB3O94955 611 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 ATP2B1P20020 1258 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 ETV4P43268 484 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 NOLC1Q14978 699 aaKnown RBP eCLIP5.7□□□□□ -1.5
ZNF540-204ENST00000586792 LMBR1LQ6UX01 489 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 TBC1D16Q8TBP0 767 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 FRAT1Q92837 279 aaPredicted RBP5.7□□□□□ -1.5
ZNF540-204ENST00000586792 LGR4Q9BXB1 951 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 CDIP1Q9H305 208 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 TAF1DQ9H5J8 278 aaPredicted RBP5.7□□□□□ -1.5
ZNF540-204ENST00000586792 DBNDD1Q9H9R9 158 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 DDX41Q9UJV9 622 aaKnown RBP5.7□□□□□ -1.5
ZNF540-204ENST00000586792 NPFFR2Q9Y5X5 522 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 LTBP1Q14766 1721 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 ZBED9Q6R2W3 1325 aa5.7□□□□□ -1.5
ZNF540-204ENST00000586792 MED23Q9ULK4 1368 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 CCDC194A0A1B0GVG4 234 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 H7C1D1 291 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 SCAMP3O14828 347 aaKnown RBP5.69□□□□□ -1.5
ZNF540-204ENST00000586792 MAP4K4O95819 1239 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-204ENST00000586792 UBTFL1P0CB47 393 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-204ENST00000586792 PAK2Q13177 524 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 GRM7Q14831 915 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 PRSS53Q2L4Q9 553 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 LDLRAD1Q5T700 205 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 RNF187Q5TA31 235 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-204ENST00000586792 EGFLAMQ63HQ2 1017 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 LDHAL6AQ6ZMR3 332 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 Q6ZPA2 131 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 USP50Q70EL3 339 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-204ENST00000586792 OTOP3Q7RTS5 596 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 FTSJ3Q8IY81 847 aaKnown RBP5.69□□□□□ -1.5
ZNF540-204ENST00000586792 CPLX3Q8WVH0 158 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 GPATCH3Q96I76 525 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 SHDQ96IW2 340 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 JAM3Q9BX67 310 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 BRINP2Q9C0B6 783 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 ADARB2Q9NS39 739 aaKnown RBP5.69□□□□□ -1.5
ZNF540-204ENST00000586792 PTGFRNQ9P2B2 879 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 NOB1Q9ULX3 412 aaKnown RBP5.69□□□□□ -1.5
ZNF540-204ENST00000586792 NOP58Q9Y2X3 529 aaKnown RBP5.69□□□□□ -1.5
ZNF540-204ENST00000586792 ZNF804BA4D1E1 1349 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 COL4A1P02462 1669 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 COL4A5P29400 1685 aa5.69□□□□□ -1.5
ZNF540-204ENST00000586792 CREB3O43889 395 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 PLIN1O60240 522 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 CSF1RP07333 972 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 NBPF7P0C2Y1 421 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-204ENST00000586792 RPS12P25398 132 aaKnown RBP5.68□□□□□ -1.5
ZNF540-204ENST00000586792 GMPSP49915 693 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-204ENST00000586792 RARSP54136 660 aaKnown RBP5.68□□□□□ -1.5
ZNF540-204ENST00000586792 GFRA1P56159 465 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 RACK1P63244 317 aaKnown RBP5.68□□□□□ -1.5
ZNF540-204ENST00000586792 FANCCQ00597 558 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 CHRNDQ07001 517 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 CXCL9Q07325 125 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 SPIRE1Q08AE8 756 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 CRHR2Q13324 411 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 CCDC144BQ3MJ40 725 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 SV2CQ496J9 727 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 LONRF3Q496Y0 759 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 USP30Q70CQ3 517 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 ZNF804AQ7Z570 1209 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-204ENST00000586792 TRMT2AQ8IZ69 625 aaKnown RBP5.68□□□□□ -1.5
ZNF540-204ENST00000586792 TMTC2Q8N394 836 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 UHMK1Q8TAS1 419 aaKnown RBP5.68□□□□□ -1.5
ZNF540-204ENST00000586792 ARMC5Q96C12 935 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 GPR101Q96P66 508 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-204ENST00000586792 BICC1Q9H694 974 aaKnown RBP5.68□□□□□ -1.5
ZNF540-204ENST00000586792 GPRC5DQ9NZD1 345 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 POLLQ9UGP5 575 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 FBXO10Q9UK96 956 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 MYO3BQ8WXR4 1341 aa5.68□□□□□ -1.5
ZNF540-204ENST00000586792 A0A1B0GUL6 1792 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 CAPN14A8MX76 684 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 PSMD14O00487 310 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 TBX1O43435 398 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 SH3BP5O60239 455 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 FRAT2O75474 233 aaPredicted RBP5.67□□□□□ -1.5
ZNF540-204ENST00000586792 PARNO95453 639 aaKnown RBP5.67□□□□□ -1.5
ZNF540-204ENST00000586792 NUDT3O95989 172 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 GNAI3P08754 354 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 MCCP23508 829 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 GTF2F1P35269 517 aaKnown RBP eCLIP5.67□□□□□ -1.5
ZNF540-204ENST00000586792 METTL24Q5JXM2 366 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 ZKSCAN2Q63HK3 967 aa5.67□□□□□ -1.5
ZNF540-204ENST00000586792 ATF7IPQ6VMQ6 1270 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms