RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 FBXW11Q9UKB1 542 aa16.62■□□□□ 0.25
SF3A2-202ENST00000586396 FBXO4Q9UKT5 387 aa16.62■□□□□ 0.25
SF3A2-202ENST00000586396 VWA8A3KMH1 1905 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 AKAP5P24588 427 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 PTENP60484 403 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 TFDP1Q14186 410 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 XKR9Q5GH70 373 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 VARS2Q5ST30 1063 aaKnown RBP16.61■□□□□ 0.25
SF3A2-202ENST00000586396 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
SF3A2-202ENST00000586396 NOSTRINQ8IVI9 506 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 RABGGTAQ92696 567 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 SECISBP2LQ93073 1101 aaKnown RBP16.61■□□□□ 0.25
SF3A2-202ENST00000586396 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 TMEM60Q9H2L4 133 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 XPNPEP1Q9NQW7 623 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 DAXXQ9UER7 740 aaPredicted RBP16.61■□□□□ 0.25
SF3A2-202ENST00000586396 POLIQ9UNA4 740 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 PCDHGA2Q9Y5H1 932 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 ZMYM2Q9UBW7 1377 aa16.61■□□□□ 0.25
SF3A2-202ENST00000586396 TADA2AO75478 443 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 DGAT1O75907 488 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 C8AP07357 584 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 HNRNPA1P09651 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
SF3A2-202ENST00000586396 SPATA31C1P0DKV0 1188 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 ARF4P18085 180 aaPredicted RBP16.6■□□□□ 0.25
SF3A2-202ENST00000586396 SDHBP21912 280 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 RARRES1P49788 294 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 NTHL1P78549 312 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 CYP4A11Q02928 519 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 PRKCQQ04759 706 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 CSTF1Q05048 431 aaKnown RBP16.6■□□□□ 0.25
SF3A2-202ENST00000586396 MBTD1Q05BQ5 628 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 HSP90AA2PQ14568 343 aaPredicted RBP16.6■□□□□ 0.25
SF3A2-202ENST00000586396 RTP2Q5QGT7 225 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 PPM1LQ5SGD2 360 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 NCAPH2Q6IBW4 605 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 SLC27A1Q6PCB7 646 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 HASPINQ8TF76 798 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 ATRIPQ8WXE1 791 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 FGF13Q92913 245 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 POLR3CQ9BUI4 534 aaPredicted RBP16.6■□□□□ 0.25
SF3A2-202ENST00000586396 DDX23Q9BUQ8 820 aaKnown RBP16.6■□□□□ 0.25
SF3A2-202ENST00000586396 TUFT1Q9NNX1 390 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 CACNG4Q9UBN1 327 aa16.6■□□□□ 0.25
SF3A2-202ENST00000586396 SMG5Q9UPR3 1016 aaKnown RBP16.6■□□□□ 0.25
SF3A2-202ENST00000586396 CCL16O15467 120 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 MARCH6O60337 910 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 XYLBO75191 536 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 NPTXRO95502 500 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 MAGEA9P43362 315 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 MCM2P49736 904 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 PFKPQ01813 784 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 CAPSQ13938 189 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 PSMD5Q16401 504 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 AMHR2Q16671 573 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 SLC44A4Q53GD3 710 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 CEP57Q86XR8 500 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 GPR161Q8N6U8 529 aaKnown RBP16.59■□□□□ 0.25
SF3A2-202ENST00000586396 C4orf32Q8N8J7 132 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 BORCS6Q96GS4 357 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 CCDC43Q96MW1 224 aaKnown RBP16.59■□□□□ 0.25
SF3A2-202ENST00000586396 TBC1D32Q96NH3 1257 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 KXD1Q9BQD3 176 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 OSBPL6Q9BZF3 934 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 KLK14Q9P0G3 267 aa16.59■□□□□ 0.25
SF3A2-202ENST00000586396 CDV3Q9UKY7 258 aaKnown RBP16.59■□□□□ 0.25
SF3A2-202ENST00000586396 MAP1BP46821 2468 aaKnown RBP16.59■□□□□ 0.25
SF3A2-202ENST00000586396 FAM170BA6NMN3 283 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 B4GALT5O43286 388 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 CD72P21854 359 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 RPA1P27694 616 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 HOXA9P31269 272 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 ARL2P36404 184 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 FXR2P51116 673 aaKnown RBP eCLIP16.58■□□□□ 0.24
SF3A2-202ENST00000586396 CTTNQ14247 550 aaKnown RBP16.58■□□□□ 0.24
SF3A2-202ENST00000586396 CDR2LQ86X02 465 aaPredicted RBP16.58■□□□□ 0.24
SF3A2-202ENST00000586396 GSTCDQ8NEC7 633 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 SLC7A14Q8TBB6 771 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 PIK3R5Q8WYR1 880 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 PAAF1Q9BRP4 392 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 TTPALQ9BTX7 342 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 LTB4R2Q9NPC1 389 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 PARP2Q9UGN5 583 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 MTF2Q9Y483 593 aaPredicted RBP16.58■□□□□ 0.24
SF3A2-202ENST00000586396 NOTCH4Q99466 2003 aa16.58■□□□□ 0.24
SF3A2-202ENST00000586396 CASTOR2A6NHX0 329 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 LAD1O00515 517 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 ZBTB39O15060 712 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 KRT37O76014 449 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 KIF4AO95239 1232 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 OR52Z1P0C646 297 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 TXKP42681 527 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 LMNB2Q03252 620 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 ZBTB41Q5SVQ8 909 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 FAM171A1Q5VUB5 890 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 RSPO2Q6UXX9 243 aaPredicted RBP16.57■□□□□ 0.24
SF3A2-202ENST00000586396 TPRG1Q6ZUI0 275 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 TPH2Q8IWU9 490 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 ITFG1Q8TB96 612 aa16.57■□□□□ 0.24
SF3A2-202ENST00000586396 ASAP3Q8TDY4 903 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms