RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 ASIC1P78348 528 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 EHHADHQ08426 723 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 COASYQ13057 564 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 SNW1Q13573 536 aaKnown RBP8.79□□□□□ -1
SMAD4-204ENST00000586253 DCAF4L1Q3SXM0 396 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 HERC4Q5GLZ8 1057 aaPredicted RBP8.79□□□□□ -1
SMAD4-204ENST00000586253 NT5DC1Q5TFE4 455 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 ATF7IP2Q5U623 682 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 FAM117BQ6P1L5 589 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 KRBA2Q6ZNG9 492 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 SFR1Q86XK3 245 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 MAP4K3Q8IVH8 894 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 ELOA2Q8IYF1 753 aaPredicted RBP8.79□□□□□ -1
SMAD4-204ENST00000586253 ENGASEQ8NFI3 743 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 BAP1Q92560 729 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 STAMQ92783 540 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 TIGD1Q96MW7 591 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 ACO2Q99798 780 aaKnown RBP8.79□□□□□ -1
SMAD4-204ENST00000586253 STRA6Q9BX79 667 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 KLF16Q9BXK1 252 aaPredicted RBP8.79□□□□□ -1
SMAD4-204ENST00000586253 TRIM6Q9C030 488 aaPredicted RBP8.79□□□□□ -1
SMAD4-204ENST00000586253 TMEM117Q9H0C3 514 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 MRPL44Q9H9J2 332 aaKnown RBP8.79□□□□□ -1
SMAD4-204ENST00000586253 SLC28A3Q9HAS3 691 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 PTPRHQ9HD43 1115 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 RWDD3Q9Y3V2 267 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 IPPQ9Y573 584 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 LCHNA4D1U4 455 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 LINC01553A4QN01 128 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 CARNS1A5YM72 827 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 INPPL1O15357 1258 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 EIF3DO15371 548 aaKnown RBP eCLIP8.78□□□□□ -1
SMAD4-204ENST00000586253 FGFR1P11362 822 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 MYOGP15173 224 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 LIG1P18858 919 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 NMT1P30419 496 aaKnown RBP8.78□□□□□ -1
SMAD4-204ENST00000586253 ABL2P42684 1182 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 KCNH2Q12809 1159 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 CUL4BQ13620 913 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 BTG3Q14201 252 aaPredicted RBP8.78□□□□□ -1
SMAD4-204ENST00000586253 DESI1Q6ICB0 168 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 GLB1LQ6UWU2 654 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 MPZL3Q6UWV2 235 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 STXBP4Q6ZWJ1 553 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 ABI1Q8IZP0 508 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 FIBCD1Q8N539 461 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 SMG8Q8ND04 991 aaKnown RBP8.78□□□□□ -1
SMAD4-204ENST00000586253 CLP1Q92989 425 aaKnown RBP8.78□□□□□ -1
SMAD4-204ENST00000586253 SAMD11Q96NU1 681 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 GBP4Q96PP9 640 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 TARS2Q9BW92 718 aaKnown RBP8.78□□□□□ -1
SMAD4-204ENST00000586253 EIF2AQ9BY44 585 aaKnown RBP8.78□□□□□ -1
SMAD4-204ENST00000586253 MRPL9Q9BYD2 267 aaKnown RBP8.78□□□□□ -1
SMAD4-204ENST00000586253 NKX2-4Q9H2Z4 354 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 ZNF576Q9H609 170 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 RNF19AQ9NV58 838 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 HOOK1Q9UJC3 728 aaKnown RBP8.78□□□□□ -1
SMAD4-204ENST00000586253 GIT1Q9Y2X7 761 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 CDH23Q9H251 3354 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 RALGAPA2Q2PPJ7 1873 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 UBE4BO95155 1302 aa8.78□□□□□ -1
SMAD4-204ENST00000586253 TBKBP1A7MCY6 615 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 ABLIM1O14639 778 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 HNRNPDLO14979 420 aaKnown RBP8.77□□□□□ -1.01
SMAD4-204ENST00000586253 KINO60870 393 aaKnown RBP8.77□□□□□ -1.01
SMAD4-204ENST00000586253 OFD1O75665 1012 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 GCNT3O95395 438 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 NPTXRO95502 500 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 LINC00271P0C7V0 271 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 MCF2P10911 925 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 ITGA4P13612 1032 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 GMPRP36959 345 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 LIG4P49917 911 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 ERVK-21P61565 698 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 TAP1Q03518 808 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 MCL1Q07820 350 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 DPYDQ12882 1025 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 PSMD2Q13200 908 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 POSTNQ15063 836 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 KYAT1Q16773 422 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 ZNF568Q3ZCX4 644 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 CLLU1OSQ5K130 101 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 FAM26FQ5R3K3 315 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 L1TD1Q5T7N2 865 aaKnown RBP8.77□□□□□ -1.01
SMAD4-204ENST00000586253 EEF1DP3Q658K8 133 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 AGMOQ6ZNB7 445 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 CDR2LQ86X02 465 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-204ENST00000586253 NPAS3Q8IXF0 933 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 GRAMD1CQ8IYS0 662 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 LRRC43Q8N309 656 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 RNF169Q8NCN4 708 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 PRR7Q8TB68 274 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 BICD1Q96G01 975 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 CASD1Q96PB1 797 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 ACCSQ96QU6 501 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 TGS1Q96RS0 853 aaKnown RBP8.77□□□□□ -1.01
SMAD4-204ENST00000586253 CDT1Q9H211 546 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 BLZF1Q9H2G9 400 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 TTYH1Q9H313 450 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-204ENST00000586253 SEMA6BQ9H3T3 888 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms