RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CASP4P49662 377 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 CYP2J2P51589 502 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GJA9P57773 515 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 LAMTOR4Q0VGL1 99 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MXD4Q14582 209 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MFSD10Q14728 455 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SND1Q7KZF4 910 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 TAS1R3Q7RTX0 852 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SRLQ86TD4 932 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 VPS36Q86VN1 386 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 LMBR1Q8WVP7 490 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GOLGA6AQ9NYA3 693 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SIP14410 1827 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 A0A0A6YYK5 440 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MAGEB2O15479 319 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 HSF2BPO75031 334 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 AKAP3O75969 853 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PGK1P00558 417 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GJB1P08034 283 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SRGAP2CP0DJJ0 459 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 RARBP10826 455 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PSEN2P49810 448 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PAK2Q13177 524 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 RAPGEF1Q13905 1077 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ARHGEF6Q15052 776 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GNASQ5JWF2 1037 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 EMC10Q5UCC4 262 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MTHFD1LQ6UB35 978 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 LRRC31Q6UY01 552 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 RHPN2Q8IUC4 686 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 WHAMMQ8TF30 809 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SETD4Q9NVD3 440 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 DMAC2Q9NW81 257 aa16.17■□□□□ 0.18
CDK5RAP3-236ENST00000584991 A0A087X0T9 212 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ANKRD63C9JTQ0 380 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PALMO75781 387 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ZMYND10O75800 440 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 FAM228BP0C875 321 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SMIM10L2AP0DMW4 78 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SMIM10L2BP0DMW5 78 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 HSPA6P17066 643 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ABCD1P33897 745 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 TNNC1P63316 161 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MARCH8Q5T0T0 291 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 IRF2BP2Q7Z5L9 587 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 CD302Q8IX05 232 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PXYLP1Q8TE99 480 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 CALR3Q96L12 384 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 RUFY1Q96T51 708 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 BEGAINQ9BUH8 593 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 UPF3AQ9H1J1 476 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PCIF1Q9H4Z3 704 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SPC25Q9HBM1 224 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 K7ERI5 159 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 BUB1O43683 1085 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PURAQ00577 322 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 STRN3Q13033 797 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 EXOC3L4Q17RC7 722 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MAP3K21Q5TCX8 1036 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 DPY19L2P1Q6NXN4 242 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 LINC01465Q8N7H1 131 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 RNF149Q8NC42 400 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 TAF4BQ92750 862 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ZNF668Q96K58 619 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 CBWD1Q9BRT8 395 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 RBM12Q9NTZ6 932 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 TMEM59LQ9UK28 342 aa16.16■□□□□ 0.18
CDK5RAP3-236ENST00000584991 TRIP12Q14669 1992 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 RRN3P2A6NIE6 340 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 HAS3O00219 553 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 UCHL3P15374 230 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 TMOD1P28289 359 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PSMC2P35998 433 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SNRPFP62306 86 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SKOR1P84550 965 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SLC9A9Q8IVB4 645 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 C12orf56Q8IXR9 622 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ACTRT1Q8TDG2 376 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 HDAC7Q8WUI4 952 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 KCNN1Q92952 543 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 BICD1Q96G01 975 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 NLRP4Q96MN2 994 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SPAG5Q96R06 1193 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MKNK1Q9BUB5 465 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 KATNAL1Q9BW62 490 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 TMEM134Q9H6X4 195 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 XPNPEP3Q9NQH7 507 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ADAMTS1Q9UHI8 967 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 USP20Q9Y2K6 914 aa16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 RRP15Q9Y3B9 282 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MYO1CO00159 1063 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 HNRNPDLO14979 420 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 ASAP2O43150 1006 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 EXOC3O60645 756 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 SCP2P22307 547 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 CXCR5P32302 372 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 TFDP1Q14186 410 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 MYBPC2Q14324 1141 aa16.14■□□□□ 0.17
CDK5RAP3-236ENST00000584991 SLC39A4Q6P5W5 647 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms