RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 GRM2Q14416 872 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 CSRP2Q16527 193 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 PABPC1LQ4VXU2 614 aaKnown RBP11.34□□□□□ -0.59
GGA3-219ENST00000584550 IL31Q6EBC2 164 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 TANGO2Q6ICL3 276 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.34□□□□□ -0.59
GGA3-219ENST00000584550 NPAS3Q8IXF0 933 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 RNF149Q8NC42 400 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 CNNM3Q8NE01 707 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
GGA3-219ENST00000584550 SLC7A14Q8TBB6 771 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 ZSCAN31Q96LW9 406 aaPredicted RBP11.34□□□□□ -0.59
GGA3-219ENST00000584550 NXF3Q9H4D5 531 aaKnown RBP11.34□□□□□ -0.59
GGA3-219ENST00000584550 LMAN1LQ9HAT1 526 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 SH3GLB2Q9NR46 395 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 DNMT3BQ9UBC3 853 aaKnown RBP11.34□□□□□ -0.59
GGA3-219ENST00000584550 NOTCH4Q99466 2003 aa11.34□□□□□ -0.59
GGA3-219ENST00000584550 WDFY3Q8IZQ1 3526 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 CHURC1-FNTBB4DL54 471 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 HRO43593 1189 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 TSPAN1O60635 241 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 XYLBO75191 536 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 HNRNPA1P09651 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
GGA3-219ENST00000584550 FDPSP14324 419 aaKnown RBP11.33□□□□□ -0.6
GGA3-219ENST00000584550 XBP1P17861 261 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 FNTBP49356 437 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 SATB1Q01826 763 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 ST3GAL1Q11201 340 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 PPP2R5DQ14738 602 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 CCDC6Q16204 474 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 PSMD5Q16401 504 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 AXDND1Q5T1B0 1012 aaPredicted RBP11.33□□□□□ -0.6
GGA3-219ENST00000584550 FAM171A1Q5VUB5 890 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 POTEHQ6S545 545 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 CDR2LQ86X02 465 aaPredicted RBP11.33□□□□□ -0.6
GGA3-219ENST00000584550 BLIDQ8IZY5 108 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 GSTCDQ8NEC7 633 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 LNX1Q8TBB1 728 aaPredicted RBP11.33□□□□□ -0.6
GGA3-219ENST00000584550 PSPC1Q8WXF1 523 aaKnown RBP11.33□□□□□ -0.6
GGA3-219ENST00000584550 SLC7A3Q8WY07 619 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 WASF1Q92558 559 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 CEP170P1Q96L14 293 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 JPH2Q9BR39 696 aaPredicted RBP11.33□□□□□ -0.6
GGA3-219ENST00000584550 TRIM6Q9C030 488 aaPredicted RBP11.33□□□□□ -0.6
GGA3-219ENST00000584550 PCDHA4Q9UN74 947 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 MRPS23Q9Y3D9 190 aaKnown RBP11.33□□□□□ -0.6
GGA3-219ENST00000584550 ZZEF1O43149 2961 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 STK36Q9NRP7 1315 aa11.33□□□□□ -0.6
GGA3-219ENST00000584550 CASTOR2A6NHX0 329 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 LRP3O75074 770 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 ECI2O75521 394 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 TDP2O95551 362 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 PMLP29590 882 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 USP11P51784 963 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 PSMC5P62195 406 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 HSP90AA2PQ14568 343 aaPredicted RBP11.32□□□□□ -0.6
GGA3-219ENST00000584550 SLC5A9Q2M3M2 681 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 HEATR6Q6AI08 1181 aaKnown RBP11.32□□□□□ -0.6
GGA3-219ENST00000584550 NOTUMQ6P988 496 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 ZNF687Q8N1G0 1237 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 RDM1Q8NG50 284 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 FAM3CQ92520 227 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 TTPALQ9BTX7 342 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 CSRNP2Q9H175 543 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 CHRDQ9H2X0 955 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 BRD9Q9H8M2 597 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 PARP2Q9UGN5 583 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 GIT1Q9Y2X7 761 aa11.32□□□□□ -0.6
GGA3-219ENST00000584550 SF3B1O75533 1304 aaKnown RBP eCLIP11.32□□□□□ -0.66e-8■■■■■ 80.2
GGA3-219ENST00000584550 INO80B-WBP1J3KQ70 363 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 EML1O00423 815 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 NRG2O14511 850 aaPredicted RBP11.31□□□□□ -0.6
GGA3-219ENST00000584550 CD2BP2O95400 341 aaKnown RBP11.31□□□□□ -0.6
GGA3-219ENST00000584550 HOXC13P31276 330 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 OR1D2P34982 312 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 CXCL12P48061 93 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 CCR3P51677 355 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 GUCY1B3Q02153 619 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 NCBP1Q09161 790 aaKnown RBP11.31□□□□□ -0.6
GGA3-219ENST00000584550 TRIM29Q14134 588 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 SF3A2Q15428 464 aaKnown RBP11.31□□□□□ -0.6
GGA3-219ENST00000584550 AASDHQ4L235 1098 aaPredicted RBP11.31□□□□□ -0.6
GGA3-219ENST00000584550 FERMT3Q86UX7 667 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 GPR65Q8IYL9 337 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 TBCKQ8TEA7 893 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 DDX1Q92499 740 aaKnown RBP11.31□□□□□ -0.6
GGA3-219ENST00000584550 RXFP3Q9NSD7 469 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
GGA3-219ENST00000584550 KCNH3Q9ULD8 1083 aa11.31□□□□□ -0.6
GGA3-219ENST00000584550 C1QTNF9BB2RNN3 333 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 MAN2B1O00754 1011 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 ZBTB39O15060 712 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 AXIN1O15169 862 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 B4GALT5O43286 388 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 KIF4AO95239 1232 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 NPTXRO95502 500 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 PROS1P07225 676 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 RHOP08100 348 aa11.3□□□□□ -0.6
GGA3-219ENST00000584550 C1QTNF9P0C862 333 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms