RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 KRT17Q04695 432 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 EMC2Q15006 297 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 CLLU1OSQ5K130 101 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 SH3PXD2AQ5TCZ1 1133 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 KCNT2Q6UVM3 1135 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 SRGAP1Q7Z6B7 1085 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 ZNF598Q86UK7 904 aaKnown RBP12.38□□□□□ -0.43
CCDC47-206ENST00000584112 CABP7Q86V35 215 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 KSR1Q8IVT5 923 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 FAM160A2Q8N612 972 aaPredicted RBP12.38□□□□□ -0.43
CCDC47-206ENST00000584112 HELQQ8TDG4 1101 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 SLC22A17Q8WUG5 538 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 PRPF31Q8WWY3 499 aaKnown RBP12.38□□□□□ -0.43
CCDC47-206ENST00000584112 CRELD1Q96HD1 420 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 ZSCAN31Q96LW9 406 aaPredicted RBP12.38□□□□□ -0.43
CCDC47-206ENST00000584112 MTRQ99707 1265 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 EIF2AK1Q9BQI3 630 aaKnown RBP12.38□□□□□ -0.43
CCDC47-206ENST00000584112 LLPHQ9BRT6 129 aaKnown RBP12.38□□□□□ -0.43
CCDC47-206ENST00000584112 ARRDC1-AS1Q9H2J1 176 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 TTC12Q9H892 705 aaPredicted RBP12.38□□□□□ -0.43
CCDC47-206ENST00000584112 WRAP73Q9P2S5 460 aaPredicted RBP12.38□□□□□ -0.43
CCDC47-206ENST00000584112 NEUROG3Q9Y4Z2 214 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 UBR5O95071 2799 aaPredicted RBP12.38□□□□□ -0.43
CCDC47-206ENST00000584112 J3QKU1 62 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 AXIN1O15169 862 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 SLITRK3O94933 977 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 LYPLA2O95372 231 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 TARSP26639 723 aaKnown RBP12.37□□□□□ -0.43
CCDC47-206ENST00000584112 HMGN5P82970 282 aaKnown RBP12.37□□□□□ -0.43
CCDC47-206ENST00000584112 LAMTOR4Q0VGL1 99 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 CTTNQ14247 550 aaKnown RBP12.37□□□□□ -0.43
CCDC47-206ENST00000584112 MXD4Q14582 209 aaPredicted RBP12.37□□□□□ -0.43
CCDC47-206ENST00000584112 LRRC55Q6ZSA7 311 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 CCDC83Q8IWF9 413 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 TMEM143Q96AN5 459 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 PGBD4Q96DM1 585 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 C8orf76Q96K31 380 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 CCDC43Q96MW1 224 aaKnown RBP12.37□□□□□ -0.43
CCDC47-206ENST00000584112 RPP25Q9BUL9 199 aaKnown RBP12.37□□□□□ -0.43
CCDC47-206ENST00000584112 IFT122Q9HBG6 1241 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 ANKEF1Q9NU02 776 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 AGPAT5Q9NUQ2 364 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 SPG21Q9NZD8 308 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 EPS15L1Q9UBC2 864 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 MSRB2Q9Y3D2 182 aa12.37□□□□□ -0.43
CCDC47-206ENST00000584112 MAP3K13O43283 966 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 ZNF623O75123 536 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 DGAT1O75907 488 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 CXCL14O95715 111 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 SRGAP2CP0DJJ0 459 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 TXKP42681 527 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 ALDH7A1P49419 539 aaKnown RBP12.36□□□□□ -0.43
CCDC47-206ENST00000584112 ST3GAL1Q11201 340 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 ORC2Q13416 577 aaPredicted RBP12.36□□□□□ -0.43
CCDC47-206ENST00000584112 BMS1Q14692 1282 aaKnown RBP12.36□□□□□ -0.43
CCDC47-206ENST00000584112 PCBP1Q15365 356 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC47-206ENST00000584112 MLF2Q15773 248 aaPredicted RBP12.36□□□□□ -0.43
CCDC47-206ENST00000584112 GLB1LQ6UWU2 654 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 FERMT3Q86UX7 667 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 TMEFF1Q8IYR6 380 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
CCDC47-206ENST00000584112 SLC39A7Q92504 469 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 CLDN23Q96B33 292 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 MTMR9Q96QG7 549 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 HSD17B14Q9BPX1 270 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 BMP2KQ9NSY1 1161 aaPredicted RBP12.36□□□□□ -0.43
CCDC47-206ENST00000584112 FAM105AQ9NUU6 356 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 CITO14578 2027 aa12.36□□□□□ -0.43
CCDC47-206ENST00000584112 URB1O60287 2271 aaKnown RBP12.36□□□□□ -0.43
CCDC47-206ENST00000584112 CHURC1-FNTBB4DL54 471 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 ERLIN2O94905 339 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 ZNF806P0C7X5 589 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 XRCC6P12956 609 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC47-206ENST00000584112 MCM7P33993 719 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 MAGEA9P43362 315 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 FNTBP49356 437 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 GUCY1B3Q02153 619 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 RNASELQ05823 741 aaKnown RBP12.35□□□□□ -0.43
CCDC47-206ENST00000584112 NCBP1Q09161 790 aaKnown RBP12.35□□□□□ -0.43
CCDC47-206ENST00000584112 FZD5Q13467 585 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 GNL2Q13823 731 aaKnown RBP12.35□□□□□ -0.43
CCDC47-206ENST00000584112 TFDP1Q14186 410 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 ZBTB41Q5SVQ8 909 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 RNF43Q68DV7 783 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 SLC39A11Q8N1S5 342 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 FAM184AQ8NB25 1140 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 RNF149Q8NC42 400 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 URGCPQ8TCY9 931 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 TMEM169Q96HH4 297 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 MKNK1Q9BUB5 465 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 OSBPL6Q9BZF3 934 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 FOXP1Q9H334 677 aaPredicted RBP12.35□□□□□ -0.43
CCDC47-206ENST00000584112 SFXN1Q9H9B4 322 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 NUMBLQ9Y6R0 609 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 CNTNAP2Q9UHC6 1331 aa12.35□□□□□ -0.43
CCDC47-206ENST00000584112 ITPR3Q14573 2671 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 DOCK6Q96HP0 2047 aa12.34□□□□□ -0.43
CCDC47-206ENST00000584112 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms