RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 RIN2Q8WYP3 895 aaPredicted RBP23.52■■□□□ 1.36
PPP4R1-228ENST00000584074 RIPOR3Q96MK2 946 aa23.52■■□□□ 1.36
PPP4R1-228ENST00000584074 NECTIN4Q96NY8 510 aa23.52■■□□□ 1.36
PPP4R1-228ENST00000584074 CCDC94Q9BW85 323 aaPredicted RBP23.52■■□□□ 1.36
PPP4R1-228ENST00000584074 CCSER1Q9C0I3 900 aa23.52■■□□□ 1.36
PPP4R1-228ENST00000584074 TSHZ2Q9NRE2 1034 aa23.52■■□□□ 1.36
PPP4R1-228ENST00000584074 LARSQ9P2J5 1176 aaKnown RBP23.52■■□□□ 1.36
PPP4R1-228ENST00000584074 ODF2LQ9ULJ1 636 aa23.52■■□□□ 1.36
PPP4R1-228ENST00000584074 SF3B1O75533 1304 aaKnown RBP eCLIP23.52■■□□□ 1.364e-6■■■■■ 34.5
PPP4R1-228ENST00000584074 SPDYE4A6NLX3 237 aa23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 STX6O43752 255 aa23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 MYBP10242 640 aa23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 HARSP12081 509 aaKnown RBP23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 IGFBP6P24592 240 aaPredicted RBP23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 YARSP54577 528 aaKnown RBP23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 SNX21Q969T3 373 aa23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 CLIC6Q96NY7 704 aa23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 SFXN1Q9H9B4 322 aa23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 MAN1C1Q9NR34 630 aa23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 ANKFY1Q9P2R3 1169 aa23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 SRPRBQ9Y5M8 271 aaKnown RBP23.51■■□□□ 1.35
PPP4R1-228ENST00000584074 SMIM28A0A1B0GU29 152 aa23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 TOM1L1O75674 476 aa23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 BRD1O95696 1058 aa23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 RPL17P18621 184 aaKnown RBP23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 NCKAP1LP55160 1127 aa23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 RTP2Q5QGT7 225 aa23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 ATAT1Q5SQI0 421 aa23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 FAM171A1Q5VUB5 890 aa23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 PRSS55Q6UWB4 352 aaPredicted RBP23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 ALKAL1Q6UXT8 129 aa23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 HAUS6Q7Z4H7 955 aa23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 USP28Q96RU2 1077 aa23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 TOPORSQ9NS56 1045 aaPredicted RBP23.5■■□□□ 1.35
PPP4R1-228ENST00000584074 FAM13AO94988 1023 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 GLUD1P00367 558 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 KRT18P05783 430 aaKnown RBP23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 SPATA31D3P0C874 917 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 CLCNKBP51801 687 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 ZNF131P52739 623 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 SEZ6Q53EL9 994 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 XKR4Q5GH76 650 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 ZPBP2Q6X784 338 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 SPATA31D4Q6ZUB0 917 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 GPR149Q86SP6 731 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 PALB2Q86YC2 1186 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 GLYCTKQ8IVS8 523 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 GPR65Q8IYL9 337 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 MYCT1Q8N699 235 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 LARP4BQ92615 738 aaKnown RBP23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 ZMAT2Q96NC0 199 aaKnown RBP23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 ACAP3Q96P50 834 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 ZSCAN16Q9H4T2 348 aaPredicted RBP23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 GOLGA2P5Q9HBQ8 144 aa23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.49■■□□□ 1.35
PPP4R1-228ENST00000584074 PRR33A8MZF0 331 aa23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 H0YCG3 227 aa23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 MEFVO15553 781 aaPredicted RBP23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 DDIT3P35638 169 aa23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 SOX4Q06945 474 aaPredicted RBP23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 NOLC1Q14978 699 aaKnown RBP eCLIP23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 CEP57Q86XR8 500 aa23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 SNX27Q96L92 541 aa23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 TTPALQ9BTX7 342 aa23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 ZHX3Q9H4I2 956 aa23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 PARVGQ9HBI0 331 aa23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 FNIP2Q9P278 1114 aa23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 NR2E1Q9Y466 385 aa23.48■■□□□ 1.35
PPP4R1-228ENST00000584074 C2CD4DB7Z1M9 353 aa23.47■■□□□ 1.35
PPP4R1-228ENST00000584074 TGM5O43548 720 aa23.47■■□□□ 1.35
PPP4R1-228ENST00000584074 B3GAT3O94766 335 aa23.47■■□□□ 1.35
PPP4R1-228ENST00000584074 UPP1Q16831 310 aa23.47■■□□□ 1.35
PPP4R1-228ENST00000584074 DCLRE1AQ6PJP8 1040 aa23.47■■□□□ 1.35
PPP4R1-228ENST00000584074 EDAQ92838 391 aa23.47■■□□□ 1.35
PPP4R1-228ENST00000584074 BICD1Q96G01 975 aa23.47■■□□□ 1.35
PPP4R1-228ENST00000584074 HAPLN2Q9GZV7 340 aa23.47■■□□□ 1.35
PPP4R1-228ENST00000584074 CLDN3O15551 220 aa23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 CREMQ03060 361 aa23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 MCL1Q07820 350 aa23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 ELAVL2Q12926 359 aaKnown RBP23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 SLC39A14Q15043 492 aa23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 CD300LGQ6UXG3 332 aa23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 C3orf58Q8NDZ4 430 aa23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 LNX1Q8TBB1 728 aaPredicted RBP23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 PIK3R5Q8WYR1 880 aa23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 UROC1Q96N76 676 aa23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 CCDC39Q9UFE4 941 aa23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 TBX20Q9UMR3 447 aa23.46■■□□□ 1.35
PPP4R1-228ENST00000584074 CCDC195A0A1B0GUA6 201 aa23.45■■□□□ 1.34
PPP4R1-228ENST00000584074 TMEM189-UBE2V1I3L0A0 370 aa23.45■■□□□ 1.34
PPP4R1-228ENST00000584074 K7ENM7 598 aa23.45■■□□□ 1.34
PPP4R1-228ENST00000584074 TRAK2O60296 914 aa23.45■■□□□ 1.34
PPP4R1-228ENST00000584074 TBCAO75347 108 aaKnown RBP23.45■■□□□ 1.34
PPP4R1-228ENST00000584074 RFPL2O75678 378 aa23.45■■□□□ 1.34
PPP4R1-228ENST00000584074 KCNE1P15382 129 aa23.45■■□□□ 1.34
PPP4R1-228ENST00000584074 MATR3P43243 847 aaKnown RBP eCLIP23.45■■□□□ 1.349e-6■■■■□ 21.7
PPP4R1-228ENST00000584074 SLC10A6Q3KNW5 377 aa23.45■■□□□ 1.34
PPP4R1-228ENST00000584074 LILRA6Q6PI73 481 aa23.45■■□□□ 1.34
PPP4R1-228ENST00000584074 C15orf39Q6ZRI6 1047 aa23.45■■□□□ 1.34
PPP4R1-228ENST00000584074 HSCBQ8IWL3 235 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms