RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 ZBTB6Q15916 424 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 SNRNP35Q16560 246 aaKnown RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 SLC10A6Q3KNW5 377 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 SPATA1Q5VX52 437 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 ANKRD40Q6AI12 368 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 TTI2Q6NXR4 508 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 CRELD2Q6UXH1 353 aaPredicted RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 CHRDL2Q6WN34 429 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 FIBCD1Q8N539 461 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 CSGALNACT2Q8N6G5 542 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 ERCC4Q92889 916 aaPredicted RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 CLP1Q92989 425 aaKnown RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 SNX27Q96L92 541 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 CASD1Q96PB1 797 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 FAM193BQ96PV7 902 aaPredicted RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 FNBP1Q96RU3 617 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 CBWD1Q9BRT8 395 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 FAM213AQ9BRX8 229 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 HAPLN2Q9GZV7 340 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 NXF3Q9H4D5 531 aaKnown RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 THAP9Q9H5L6 903 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 RC3H2Q9HBD1 1191 aaKnown RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 RBAKQ9NYW8 714 aaPredicted RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 UBQLN1Q9UMX0 589 aaKnown RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 MAPK8IP1Q9UQF2 711 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 COL4A6Q14031 1691 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 SCN5AQ14524 2016 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 SMIM28A0A1B0GU29 152 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 ARHGEF37A1IGU5 675 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 CLIC2O15247 247 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 PMM2O15305 246 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 UPP2O95045 317 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 CD44P16070 742 aaKnown RBP10.11□□□□□ -0.79
UBBP4-201ENST00000583708 LAG3P18627 525 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 ALDH7A1P49419 539 aaKnown RBP10.11□□□□□ -0.79
UBBP4-201ENST00000583708 ACOT2P49753 483 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 CYP2J2P51589 502 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 RNASELQ05823 741 aaKnown RBP10.11□□□□□ -0.79
UBBP4-201ENST00000583708 CYP24A1Q07973 514 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 TUSC3Q13454 348 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 ENOX2Q16206 610 aaKnown RBP10.11□□□□□ -0.79
UBBP4-201ENST00000583708 TPD52L1Q16890 204 aaPredicted RBP10.11□□□□□ -0.79
UBBP4-201ENST00000583708 DUOXA2Q1HG44 320 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 ZSCAN23Q3MJ62 389 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 CLLU1OSQ5K130 101 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 ISM2Q6H9L7 571 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 CDR2LQ86X02 465 aaPredicted RBP10.11□□□□□ -0.79
UBBP4-201ENST00000583708 WDR49Q8IV35 697 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 GPR65Q8IYL9 337 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 SMYD4Q8IYR2 804 aaPredicted RBP10.11□□□□□ -0.79
UBBP4-201ENST00000583708 RNF169Q8NCN4 708 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 BEST2Q8NFU1 509 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 FAXDC2Q96IV6 333 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 GAD1Q99259 594 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 COLEC11Q9BWP8 271 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 RNF39Q9H2S5 420 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 RNF19AQ9NV58 838 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 ARMCX3Q9UH62 379 aaPredicted RBP10.11□□□□□ -0.79
UBBP4-201ENST00000583708 PCDHB12Q9Y5F1 795 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 SIP14410 1827 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 MICAL3Q7RTP6 2002 aa10.11□□□□□ -0.79
UBBP4-201ENST00000583708 TBKBP1A7MCY6 615 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 LACTBL1A8MY62 500 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 TMEM189-UBE2V1I3L0A0 370 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 FAM163BP0C2L3 166 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 HARSP12081 509 aaKnown RBP10.1□□□□□ -0.79
UBBP4-201ENST00000583708 AKAP5P24588 427 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 LRPAP1P30533 357 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 PNPLA4P41247 253 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 TPM4P67936 248 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 UBE3AQ05086 875 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 SPAG1Q07617 926 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 DSC1Q08554 894 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 ELAVL2Q12926 359 aaKnown RBP10.1□□□□□ -0.79
UBBP4-201ENST00000583708 BMS1Q14692 1282 aaKnown RBP10.1□□□□□ -0.79
UBBP4-201ENST00000583708 TMEM132DQ14C87 1099 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 DPCR1Q3MIW9 517 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 CEP135Q66GS9 1140 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 FAM109BQ6ICB4 259 aaPredicted RBP10.1□□□□□ -0.79
UBBP4-201ENST00000583708 KLHL10Q6JEL2 608 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 DCLRE1AQ6PJP8 1040 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 FAM186BQ8IYM0 893 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 GSTCDQ8NEC7 633 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 ANKRD20A12PQ8NF67 263 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 HELQQ8TDG4 1101 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 PARD3BQ8TEW8 1205 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 ANKRD36BP1Q96IX9 119 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 PPP1R10Q96QC0 940 aaKnown RBP10.1□□□□□ -0.79
UBBP4-201ENST00000583708 DUSP9Q99956 384 aaKnown RBP10.1□□□□□ -0.79
UBBP4-201ENST00000583708 FUCA2Q9BTY2 467 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 PCIF1Q9H4Z3 704 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 TBC1D13Q9NVG8 400 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 LZTS1Q9Y250 596 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 USP20Q9Y2K6 914 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 R3HCC1Q9Y3T6 440 aaKnown RBP10.1□□□□□ -0.79
UBBP4-201ENST00000583708 HES2Q9Y543 173 aa10.1□□□□□ -0.79
UBBP4-201ENST00000583708 C5orf67F2Z3F1 127 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 P4HA2O15460 535 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 TRAPPC3O43617 180 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 N4BP1O75113 896 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms