RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 EXD1Q8NHP7 514 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 KRT35Q92764 455 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 PDCD2LQ9BRP1 358 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 RUSC1Q9BVN2 902 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 RGL1Q9NZL6 768 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 EXOC1LA0A1B0GW35 172 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 MEIS2O14770 477 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 SLITRK3O94933 977 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 KRT19P08727 400 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 STIP1P31948 543 aaKnown RBP6.22□□□□□ -1.41
RTTN-209ENST00000583043 SERPINB9P50453 376 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 STAT5BP51692 787 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 IGBP1P78318 339 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 PRPSAP1Q14558 356 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 IL17AQ16552 155 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 ZNF699Q32M78 642 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 WDR59Q6PJI9 974 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 APTXQ7Z2E3 356 aaKnown RBP6.22□□□□□ -1.41
RTTN-209ENST00000583043 THNSL1Q8IYQ7 743 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 PNKPQ96T60 521 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 OATP04181 439 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 ACTN1P12814 892 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 CNGA1P29973 690 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 CXCR5P32302 372 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 ACADSBP45954 432 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 IRAK1P51617 712 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 HSD17B4P51659 736 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 BACE1P56817 501 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 CCNG2Q16589 344 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 BEST2Q8NFU1 509 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 PAIP2Q9BPZ3 127 aaKnown RBP6.22□□□□□ -1.41
RTTN-209ENST00000583043 TMBIM4Q9HC24 238 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 RRN3P2A6NIE6 340 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 UBE2Q2LH0YL09 131 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 NKRFO15226 690 aaKnown RBP eCLIP6.22□□□□□ -1.41
RTTN-209ENST00000583043 AKAP3O75969 853 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 MMEP08473 750 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 SLC20A2Q08357 652 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 WDR49Q8IV35 697 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 MCUR1Q96AQ8 359 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 DDX47Q9H0S4 455 aaKnown RBP6.22□□□□□ -1.41
RTTN-209ENST00000583043 RSAD1Q9HA92 442 aa6.22□□□□□ -1.41
RTTN-209ENST00000583043 GOLGA8CPA6NN73 597 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 MTSS1O43312 755 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 RAD51CO43502 376 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 MTA2O94776 668 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 SUPT20HL2P0C7V6 817 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 HARSP12081 509 aaKnown RBP6.21□□□□□ -1.41
RTTN-209ENST00000583043 COILP38432 576 aaPredicted RBP6.21□□□□□ -1.41
RTTN-209ENST00000583043 PNPLA4P41247 253 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 ATP1A2P50993 1020 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 PMS1P54277 932 aaKnown RBP6.21□□□□□ -1.41
RTTN-209ENST00000583043 CORO7P57737 925 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 MYL6P60660 151 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 SP4Q02446 784 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 NAA30Q147X3 362 aaPredicted RBP6.21□□□□□ -1.41
RTTN-209ENST00000583043 PSMD6Q15008 389 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 NBPF20Q3BBV1 942 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 SWSAP1Q6NVH7 229 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 RFX6Q8HWS3 928 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 RASGEF1CQ8N431 466 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 SYTL5Q8TDW5 730 aaPredicted RBP6.21□□□□□ -1.41
RTTN-209ENST00000583043 WRNIP1Q96S55 665 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 MROH8Q9H579 483 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 IPO11Q9UI26 975 aaKnown RBP6.21□□□□□ -1.41
RTTN-209ENST00000583043 BCS1LQ9Y276 419 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 ROBO1Q9Y6N7 1651 aa6.21□□□□□ -1.41
RTTN-209ENST00000583043 NWD2Q9ULI1 1742 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 RBP5P82980 135 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 DCAF4L1Q3SXM0 396 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 ARL13BQ3SXY8 428 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 METTL13Q8N6R0 699 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 GDAP1L1Q96MZ0 367 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 TBCBQ99426 244 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 TMEM109Q9BVC6 243 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 AP1M1Q9BXS5 423 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 ANKFY1Q9P2R3 1169 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 SNX24Q9Y343 169 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 CAPN6Q9Y6Q1 641 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 LRRD1A4D1F6 860 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 DDTLA6NHG4 134 aaPredicted RBP6.21□□□□□ -1.42
RTTN-209ENST00000583043 INO80B-WBP1J3KQ70 363 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 CXCL11O14625 94 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 MT-ND3P03897 115 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 NFIAQ12857 509 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 PTP4A2Q12974 167 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 SPP2Q13103 211 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 TBCCQ15814 346 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 BOLA3Q53S33 107 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 EAPPQ56P03 285 aaPredicted RBP6.21□□□□□ -1.42
RTTN-209ENST00000583043 EPM2AIP1Q7L775 607 aaPredicted RBP6.21□□□□□ -1.42
RTTN-209ENST00000583043 FAM213AQ9BRX8 229 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 SLC38A10Q9HBR0 1119 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 MRPL40Q9NQ50 206 aaKnown RBP6.21□□□□□ -1.42
RTTN-209ENST00000583043 SLC24A2Q9UI40 661 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 STAP1Q9ULZ2 295 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 RGPD2P0DJD1 1756 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 DAPK3O43293 454 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 PROSCO94903 275 aa6.21□□□□□ -1.42
RTTN-209ENST00000583043 KRT14P02533 472 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms