RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 KIAA0319Q5VV43 1072 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 RESP18Q5W5W9 173 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 CNNM4Q6P4Q7 775 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 MAP4K3Q8IVH8 894 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 VN1R2Q8NFZ6 395 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 HVCN1Q96D96 273 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 UHRF1Q96T88 793 aaPredicted RBP15.28■□□□□ 0.04
GGA3-215ENST00000582821 TNMDQ9H2S6 317 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 ZHX3Q9H4I2 956 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 OLFML3Q9NRN5 406 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 CHST7Q9NS84 486 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 CD207Q9UJ71 328 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 ADAM28Q9UKQ2 775 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 MBTPS2O43462 519 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 PPP1R37O75864 691 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 SRGAP2BP0DMP2 458 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 LIG4P49917 911 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 AMPD3Q01432 767 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 SMAD4Q13485 552 aaKnown RBP15.27■□□□□ 0.04
GGA3-215ENST00000582821 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.04
GGA3-215ENST00000582821 KYAT1Q16773 422 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 TAS1R1Q7RTX1 841 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 PPFIBP1Q86W92 1011 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 SFR1Q86XK3 245 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 SMRP1Q8NCR6 262 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 CASP10Q92851 521 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 SNX27Q96L92 541 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 PAAF1Q9BRP4 392 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 GPR62Q9BZJ7 368 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 HAPLN2Q9GZV7 340 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 PLEKHA5Q9HAU0 1116 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 RXFP1Q9HBX9 757 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 MRPL17Q9NRX2 175 aaKnown RBP15.27■□□□□ 0.04
GGA3-215ENST00000582821 CNTN3Q9P232 1028 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 ATP6V1DQ9Y5K8 247 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 STYXL1Q9Y6J8 313 aa15.27■□□□□ 0.04
GGA3-215ENST00000582821 PDCD11Q14690 1871 aaKnown RBP15.27■□□□□ 0.03
GGA3-215ENST00000582821 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.26■□□□□ 0.03
GGA3-215ENST00000582821 CASTOR2A6NHX0 329 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 F8W810 466 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 TMEM189-UBE2V1I3L0A0 370 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 HNRNPDLO14979 420 aaKnown RBP15.26■□□□□ 0.03
GGA3-215ENST00000582821 TADA2AO75478 443 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 C1RP00736 705 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 CLTAP09496 248 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 IL9P15248 144 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 HOXB8P17481 243 aaPredicted RBP15.26■□□□□ 0.03
GGA3-215ENST00000582821 OSTNP61366 133 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 KRT85P78386 507 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 DSG1Q02413 1049 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 SMAD2Q15796 467 aaKnown RBP15.26■□□□□ 0.03
GGA3-215ENST00000582821 SLC10A6Q3KNW5 377 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 USP41Q3LFD5 358 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 ZC2HC1CQ53FD0 456 aaPredicted RBP15.26■□□□□ 0.03
GGA3-215ENST00000582821 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
GGA3-215ENST00000582821 ADALQ6DHV7 355 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 ANKRD54Q6NXT1 300 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 FUT10Q6P4F1 479 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 DCLRE1AQ6PJP8 1040 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 SLC22A17Q8WUG5 538 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 LEO1Q8WVC0 666 aaPredicted RBP15.26■□□□□ 0.03
GGA3-215ENST00000582821 AUTS2Q8WXX7 1259 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 BICD1Q96G01 975 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 DDX27Q96GQ7 796 aaKnown RBP15.26■□□□□ 0.03
GGA3-215ENST00000582821 UROC1Q96N76 676 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 KLHL5Q96PQ7 755 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 PYM1Q9BRP8 204 aaKnown RBP15.26■□□□□ 0.03
GGA3-215ENST00000582821 EMILIN2Q9BXX0 1053 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 S1PR5Q9H228 398 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 MAGEF1Q9HAY2 307 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 SLC38A7Q9NVC3 462 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 FAM13BQ9NYF5 915 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 ANKFY1Q9P2R3 1169 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 PRKAG3Q9UGI9 489 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 BARX2Q9UMQ3 279 aaPredicted RBP15.26■□□□□ 0.03
GGA3-215ENST00000582821 HCFC2Q9Y5Z7 792 aa15.26■□□□□ 0.03
GGA3-215ENST00000582821 MTCL1Q9Y4B5 1905 aaKnown RBP15.25■□□□□ 0.03
GGA3-215ENST00000582821 A0A0B4J269 797 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 TNFRSF10AO00220 468 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 OGTO15294 1046 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 POLR2DO15514 142 aaKnown RBP15.25■□□□□ 0.03
GGA3-215ENST00000582821 MEFVO15553 781 aaPredicted RBP15.25■□□□□ 0.03
GGA3-215ENST00000582821 FAM189A1O60320 539 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 URODP06132 367 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 ADRB2P07550 413 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 CNPP09543 421 aaKnown RBP15.25■□□□□ 0.03
GGA3-215ENST00000582821 IDEP14735 1019 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 GLUD2P49448 558 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 RBM10P98175 930 aaKnown RBP15.25■□□□□ 0.03
GGA3-215ENST00000582821 POU5F1Q01860 360 aaKnown RBP15.25■□□□□ 0.03
GGA3-215ENST00000582821 ELAVL2Q12926 359 aaKnown RBP15.25■□□□□ 0.03
GGA3-215ENST00000582821 ALCAMQ13740 583 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 SLFN12LQ6IEE8 588 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 SLC39A4Q6P5W5 647 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 SYCE2Q6PIF2 218 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 CCDC65Q8IXS2 484 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 TMEM87AQ8NBN3 555 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 DHX58Q96C10 678 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 ZMAT2Q96NC0 199 aaKnown RBP15.25■□□□□ 0.03
GGA3-215ENST00000582821 TSPAN18Q96SJ8 248 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms