RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 LENG9Q96B70 501 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 KXD1Q9BQD3 176 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 LSM14BQ9BX40 385 aaKnown RBP6.97□□□□□ -1.29
TVP23B-210ENST00000582288 GPR62Q9BZJ7 368 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 ZMYND12Q9H0C1 365 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 RWDD1Q9H446 243 aaPredicted RBP6.97□□□□□ -1.29
TVP23B-210ENST00000582288 ADAM28Q9UKQ2 775 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 ZMIZ1Q9ULJ6 1067 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 GIT1Q9Y2X7 761 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 PRG3Q9Y2Y8 225 aaPredicted RBP6.97□□□□□ -1.29
TVP23B-210ENST00000582288 TAF6LQ9Y6J9 622 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 SF3B1O75533 1304 aaKnown RBP eCLIP6.97□□□□□ -1.29
TVP23B-210ENST00000582288 FAM208BQ5VWN6 2430 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 LAMA1P25391 3075 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 COL4A3Q01955 1670 aa6.96□□□□□ -1.29
TVP23B-210ENST00000582288 GDF9O60383 454 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 DKC1O60832 514 aaKnown RBP eCLIP6.96□□□□□ -1.3
TVP23B-210ENST00000582288 GAS7O60861 476 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 C8AP07357 584 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 RXRAP19793 462 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 GNA11P29992 359 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 USP11P51784 963 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 RCAN1P53805 252 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 POU5F1BQ06416 359 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 NCBP1Q09161 790 aaKnown RBP6.96□□□□□ -1.3
TVP23B-210ENST00000582288 ELAVL2Q12926 359 aaKnown RBP6.96□□□□□ -1.3
TVP23B-210ENST00000582288 RAB33AQ14088 237 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 LPAL2Q16609 132 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 UGCGQ16739 394 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 MTERF2Q49AM1 385 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 PABPC1LQ4VXU2 614 aaKnown RBP6.96□□□□□ -1.3
TVP23B-210ENST00000582288 B3GNT9Q6UX72 402 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 PRR23BQ6ZRT6 265 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 MAP4K3Q8IVH8 894 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 REXO1Q8N1G1 1221 aaKnown RBP6.96□□□□□ -1.3
TVP23B-210ENST00000582288 FAM160A2Q8N612 972 aaPredicted RBP6.96□□□□□ -1.3
TVP23B-210ENST00000582288 GSTCDQ8NEC7 633 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 EXOC6Q8TAG9 804 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 ITFG1Q8TB96 612 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 SLC7A3Q8WY07 619 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 FAM3CQ92520 227 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 NLRP4Q96MN2 994 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 GAD1Q99259 594 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 CLSTN3Q9BQT9 956 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 TEKT3Q9BXF9 490 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 LMAN1LQ9HAT1 526 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 C6orf50Q9HD87 102 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 HEBP1Q9NRV9 189 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 RXFP3Q9NSD7 469 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 IPPQ9Y573 584 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 PCDHGA5Q9Y5G8 931 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 COL4A3BPQ9Y5P4 624 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 NBEAQ8NFP9 2946 aa6.96□□□□□ -1.3
TVP23B-210ENST00000582288 WDR81Q562E7 1941 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 CCDC163A0A0D9SF12 145 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 MSH4O15457 936 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 SGSM2O43147 1006 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 TADA2AO75478 443 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 PSMD10O75832 226 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 AKAP3O75969 853 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 KCNK5O95279 499 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 MYBP10242 640 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 CHRNB1P11230 501 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 CHMLP26374 656 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 MLH1P40692 756 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 RFC5P40937 340 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 NTHL1P78549 312 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 SPIRE1Q08AE8 756 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 GRIK3Q13003 919 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 LRRC32Q14392 662 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 PFKFB3Q16875 520 aaPredicted RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 AASDHQ4L235 1098 aaPredicted RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 RTP2Q5QGT7 225 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 AXDND1Q5T1B0 1012 aaPredicted RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 STPG1Q5TH74 334 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 LRCH2Q5VUJ6 765 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 JAKMIP3Q5VZ66 844 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 NOTUMQ6P988 496 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 APOA5Q6Q788 366 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 LRSAM1Q6UWE0 723 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 ANO5Q75V66 913 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 WDR5BQ86VZ2 330 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 KSR1Q8IVT5 923 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 C12orf50Q8NA57 414 aaPredicted RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 ST13P5Q8NFI4 369 aaPredicted RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 LNX1Q8TBB1 728 aaPredicted RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 BICD2Q8TD16 824 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 DEPDC1BQ8WUY9 529 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 TCP11Q8WWU5 503 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 PRPF31Q8WWY3 499 aaKnown RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 PSPC1Q8WXF1 523 aaKnown RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 TTPALQ9BTX7 342 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 TRMT61BQ9BVS5 477 aaKnown RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 UNC45AQ9H3U1 944 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 DHX33Q9H6R0 707 aaKnown RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 BRD9Q9H8M2 597 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 ZFP14Q9HCL3 533 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 ZNF334Q9HCZ1 680 aaPredicted RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 MIOSQ9NXC5 875 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 DNMT3BQ9UBC3 853 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms