RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 GUCA2AQ02747 115 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 MCM6Q14566 821 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 KARSQ15046 597 aaKnown RBP10.69□□□□□ -0.7
TOP3A-211ENST00000581536 MAPK6Q16659 721 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 TMEM132AQ24JP5 1023 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 TMEM119Q4V9L6 283 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 FOXD4L5Q5VV16 416 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-211ENST00000581536 PDE12Q6L8Q7 609 aaKnown RBP10.69□□□□□ -0.7
TOP3A-211ENST00000581536 BRAPQ7Z569 592 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 DDX53Q86TM3 631 aaKnown RBP10.69□□□□□ -0.7
TOP3A-211ENST00000581536 FOXD4L4Q8WXT5 416 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-211ENST00000581536 KIFAP3Q92845 792 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 CCDC51Q96ER9 411 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 TMEM169Q96HH4 297 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 EPSTI1Q96J88 318 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 ZBTB45Q96K62 511 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-211ENST00000581536 PAAF1Q9BRP4 392 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 ZBP1Q9H171 429 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 C2orf40Q9H1Z8 148 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 NGRNQ9NPE2 291 aaKnown RBP10.69□□□□□ -0.7
TOP3A-211ENST00000581536 UBN1Q9NPG3 1134 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 BLOC1S4Q9NUP1 217 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 MARCH5Q9NX47 278 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 KANSL3Q9P2N6 904 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 TFIP11Q9UBB9 837 aaKnown RBP10.69□□□□□ -0.7
TOP3A-211ENST00000581536 CD207Q9UJ71 328 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 CDH22Q9UJ99 828 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 PCDHGC3Q9UN70 934 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 GIT1Q9Y2X7 761 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 PRG3Q9Y2Y8 225 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-211ENST00000581536 TCHHQ07283 1943 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 INPPL1O15357 1258 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 CTSAP10619 480 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 PDCP20941 246 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 UBA7P41226 1012 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 DSC1Q08554 894 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 SMC1AQ14683 1233 aaKnown RBP10.68□□□□□ -0.7
TOP3A-211ENST00000581536 PPP2R5AQ15172 486 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 TUSC1Q2TAM9 212 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 SYCE2Q6PIF2 218 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 RNF19BQ6ZMZ0 732 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 ZBTB33Q86T24 672 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 C12orf76Q8N812 135 aaPredicted RBP10.68□□□□□ -0.7
TOP3A-211ENST00000581536 PPP2R3CQ969Q6 453 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 SNX21Q969T3 373 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 PRIMPOLQ96LW4 560 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 USP28Q96RU2 1077 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 ACO2Q99798 780 aaKnown RBP10.68□□□□□ -0.7
TOP3A-211ENST00000581536 PANK2Q9BZ23 570 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 S1PR5Q9H228 398 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 KMT5AQ9NQR1 393 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 GDAQ9Y2T3 454 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 C2orf16Q68DN1 1984 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 VWA8A3KMH1 1905 aa10.68□□□□□ -0.7
TOP3A-211ENST00000581536 C2CD2LO14523 706 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 PTGESO14684 152 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 N4BP3O15049 544 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 STX6O43752 255 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 LILRB3O75022 631 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 EFEMP2O95967 443 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 MYBP10242 640 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 PLCG1P19174 1290 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 GUCY2CP25092 1073 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 LONP1P36776 959 aaKnown RBP10.67□□□□□ -0.7
TOP3A-211ENST00000581536 EFNA5P52803 228 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 OSTNP61366 133 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 COASYQ13057 564 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 SMAD2Q15796 467 aaKnown RBP10.67□□□□□ -0.7
TOP3A-211ENST00000581536 ATF7IP2Q5U623 682 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 ANKRD54Q6NXT1 300 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 TMEM184AQ6ZMB5 413 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 GJD3Q8N144 294 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 TMEM130Q8N3G9 435 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 CEP120Q8N960 986 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 SLC22A17Q8WUG5 538 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 CDK5RAP3Q96JB5 506 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 B3GALT6Q96L58 329 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 AK8Q96MA6 479 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 USB1Q9BQ65 265 aaKnown RBP10.67□□□□□ -0.7
TOP3A-211ENST00000581536 TMEM175Q9BSA9 504 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 NTPCRQ9BSD7 190 aaKnown RBP10.67□□□□□ -0.7
TOP3A-211ENST00000581536 TARS2Q9BW92 718 aaKnown RBP10.67□□□□□ -0.7
TOP3A-211ENST00000581536 GPR62Q9BZJ7 368 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 SLC6A16Q9GZN6 736 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 NT5C3AQ9H0P0 336 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 PTPRHQ9HD43 1115 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 FBXO2Q9UK22 296 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-211ENST00000581536 ANK1P16157 1881 aa10.67□□□□□ -0.7
TOP3A-211ENST00000581536 PDCD11Q14690 1871 aaKnown RBP10.67□□□□□ -0.7
TOP3A-211ENST00000581536 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-211ENST00000581536 RECQL4O94761 1208 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 WEE2P0C1S8 567 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 EPCAMP16422 314 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 DDIT3P35638 169 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 ZP2Q05996 745 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 SMAD4Q13485 552 aaKnown RBP10.66□□□□□ -0.7
TOP3A-211ENST00000581536 GIT2Q14161 759 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 NAB2Q15742 525 aa10.66□□□□□ -0.7
TOP3A-211ENST00000581536 FOXD4L6Q3SYB3 417 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-211ENST00000581536 MSS51Q4VC12 460 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms