RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 SERPINC1P01008 464 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 FGBP02675 491 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TPM2P07951 284 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CXCL8P10145 99 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ACTN1P12814 892 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 SYN1P17600 705 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 AKAP5P24588 427 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 GTF2H1P32780 548 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 COPB1P53618 953 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 AP3M2P53677 418 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 DLG4P78352 724 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 MAN2A1Q16706 1144 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 FILIP1LQ4L180 1135 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 VWA3BQ502W6 1294 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 C1orf220Q5T0J3 134 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 AGMOQ6ZNB7 445 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 APTXQ7Z2E3 356 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 NT5DC4Q86YG4 428 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CRIPAKQ8N1N5 446 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 SLC35C1Q96A29 364 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 APOL6Q9BWW8 343 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 NXF3Q9H4D5 531 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PDE11AQ9HCR9 933 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TOPORSQ9NS56 1045 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TMEM161AQ9NX61 479 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PARP2Q9UGN5 583 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ZMYND8Q9ULU4 1186 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 DERAQ9Y315 318 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PCDHB7Q9Y5E2 793 aa9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDK5RAP3-220ENST00000581160 LRRIQ3A6PVS8 624 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PMM2O15305 246 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 INPPL1O15357 1258 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 OFD1O75665 1012 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 RECQL4O94761 1208 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ACRP10323 421 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 KCNE1P15382 129 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ATF7P17544 494 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TNNI1P19237 187 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 RGS19P49795 217 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 WNT7BP56706 349 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 KCNH2Q12809 1159 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 NR1I3Q14994 352 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ZBTB6Q15916 424 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 DUOXA2Q1HG44 320 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 MIIPQ5JXC2 388 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 SARM1Q6SZW1 724 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ZNF365Q70YC5 407 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 WDR49Q8IV35 697 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CACTINQ8WUQ7 758 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ZNF516Q92618 1163 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 LPPQ93052 612 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CCDC127Q96BQ5 260 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 SNX27Q96L92 541 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 NAP1L5Q96NT1 182 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 FNBP1Q96RU3 617 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 POP1Q99575 1024 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CGRRF1Q99675 332 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 LBHD1Q9BQE6 289 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 VPS16Q9H269 839 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 NDST4Q9H3R1 872 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 GRPEL1Q9HAV7 217 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 RTN4Q9NQC3 1192 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 INTS13Q9NVM9 706 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TAB2Q9NYJ8 693 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 KLK14Q9P0G3 267 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CNTN3Q9P232 1028 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 DNAH12Q6ZR08 3092 aa9.93□□□□□ -0.82
CDK5RAP3-220ENST00000581160 A0A1B0GTH6 734 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 SMIM28A0A1B0GU29 152 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 MEIS3P2A8K0S8 358 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 P4HA2O15460 535 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 AP5Z1O43299 807 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CBFA2T2O43439 604 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 AFPP02771 609 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 AMHP03971 560 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 C4BPAP04003 597 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TRIM49P0CI25 452 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TRIM49CP0CI26 452 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 DLATP10515 647 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 MRE11P49959 708 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 EPHB4P54760 987 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 UBASH3AP57075 661 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PPP3CAQ08209 521 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 DCAF17Q5H9S7 520 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TMEM240Q5SV17 173 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TCERG1LQ5VWI1 586 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 JADE1Q6IE81 842 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PSRC1Q6PGN9 363 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 NPAS4Q8IUM7 802 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 RNF169Q8NCN4 708 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 GSTCDQ8NEC7 633 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 RSPH1Q8WYR4 309 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 HERVK_113Q902F9 699 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TOP1MTQ969P6 601 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 GAD1Q99259 594 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CXCL16Q9H2A7 254 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 RSAD1Q9HA92 442 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms