RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 LRGUKQ96M69 825 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 AIFM3Q96NN9 605 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 PPP1R9BQ96SB3 815 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 SLF1Q9BQI6 1058 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 TXLNGYQ9BZA5 131 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 NRDE2Q9H7Z3 1164 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 UBN1Q9NPG3 1134 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 CD93Q9NPY3 652 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 ANLNQ9NQW6 1124 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 ZNF277Q9NRM2 450 aaPredicted RBP7.12□□□□□ -1.27
COPS3-216ENST00000579716 IL1RAPL1Q9NZN1 696 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.12□□□□□ -1.27
COPS3-216ENST00000579716 EXTL2Q9UBQ6 330 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 FAM8A1Q9UBU6 413 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 CHORDC1Q9UHD1 332 aaPredicted RBP7.12□□□□□ -1.27
COPS3-216ENST00000579716 EIF2B4Q9UI10 523 aaKnown RBP7.12□□□□□ -1.27
COPS3-216ENST00000579716 ZFP37Q9Y6Q3 630 aaPredicted RBP7.12□□□□□ -1.27
COPS3-216ENST00000579716 A0A0B4J269 797 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 LRRC72A6NJI9 287 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 F5H0A9 414 aaPredicted RBP7.11□□□□□ -1.27
COPS3-216ENST00000579716 NFIBO00712 420 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 ITGB1P05556 798 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 RHCEP18577 417 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 CYP11B2P19099 503 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 TFEBP19484 476 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 YY1P25490 414 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 MCM4P33991 863 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 KCNJ4P48050 445 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 IFNAR2P48551 515 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 ALDH3A2P51648 485 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 BLVRAP53004 296 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 RHDQ02161 417 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 ITIH3Q06033 890 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 TNK2Q07912 1038 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 PRKG1Q13976 671 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 NEDD9Q14511 834 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 DHCR24Q15392 516 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 STK11Q15831 433 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 KCNA10Q16322 511 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 SUPT20HL1Q3ZLR7 823 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 FNDC3BQ53EP0 1204 aaKnown RBP7.11□□□□□ -1.27
COPS3-216ENST00000579716 HHATQ5VTY9 493 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 METTL11BQ5VVY1 283 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 SCARA3Q6AZY7 606 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 OTUD7BQ6GQQ9 843 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 PPP1R21Q6ZMI0 780 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 FAM47EQ6ZV65 393 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 DGLUCYQ7Z3D6 616 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 SPATA24Q86W54 205 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 SLC7A5P1Q8MH63 180 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 CPA6Q8N4T0 437 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 ATP11CQ8NB49 1132 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 BBOF1Q8ND07 529 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 DENND6BQ8NEG7 585 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 GOT1L1Q8NHS2 421 aaPredicted RBP7.11□□□□□ -1.27
COPS3-216ENST00000579716 GAL3ST3Q96A11 431 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 MIPEPQ99797 713 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 UQCC2Q9BRT2 126 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 NOC4LQ9BVI4 516 aaKnown RBP7.11□□□□□ -1.27
COPS3-216ENST00000579716 WNT10AQ9GZT5 417 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 PDLIM7Q9NR12 457 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 OLA1Q9NTK5 396 aaKnown RBP7.11□□□□□ -1.27
COPS3-216ENST00000579716 INTS7Q9NVH2 962 aaKnown RBP7.11□□□□□ -1.27
COPS3-216ENST00000579716 TBC1D14Q9P2M4 693 aa7.11□□□□□ -1.27
COPS3-216ENST00000579716 SMG5Q9UPR3 1016 aaKnown RBP7.11□□□□□ -1.27
COPS3-216ENST00000579716 GPR75-ASB3A0A0A6YYF3 556 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 LRRC14BA6NHZ5 514 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 GOLGA8AA7E2F4 631 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 GOLGA8BA8MQT2 603 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 MINDY4BA8MYZ0 360 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 TXNL1O43396 289 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 SOCS5O75159 536 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 GJB6O95452 261 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 NPTXRO95502 500 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 STARD3NLO95772 234 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 ASGR2P07307 311 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 VIMP08670 466 aaKnown RBP7.1□□□□□ -1.27
COPS3-216ENST00000579716 TPM1P09493 284 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 INHBBP09529 407 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 FAM153BP0C7A2 387 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 SRGAP2BP0DMP2 458 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 TMEM11P17152 192 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 SFPQP23246 707 aaKnown RBP eCLIP7.1□□□□□ -1.27
COPS3-216ENST00000579716 MAPK3P27361 379 aaPredicted RBP7.1□□□□□ -1.27
COPS3-216ENST00000579716 PRKAR1BP31321 381 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 CA8P35219 290 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 TKTL1P51854 596 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 DRG2P55039 364 aaKnown RBP7.1□□□□□ -1.27
COPS3-216ENST00000579716 EIF6P56537 245 aaKnown RBP7.1□□□□□ -1.27
COPS3-216ENST00000579716 RUNX1T1Q06455 604 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 ADAM15Q13444 863 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 NUP54Q7Z3B4 507 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 DNAJB7Q7Z6W7 309 aaPredicted RBP7.1□□□□□ -1.27
COPS3-216ENST00000579716 TTC6Q86TZ1 520 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 AADATQ8N5Z0 425 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 FAM169BQ8N8A8 192 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 ANKRD53Q8N9V6 530 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 SPC24Q8NBT2 197 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 MDM1Q8TC05 714 aa7.1□□□□□ -1.27
COPS3-216ENST00000579716 MIPOL1Q8TD10 442 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms