RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 FERMT3Q86UX7 667 aa12.47□□□□□ -0.41
SUPT4H1-203ENST00000579289 FAM160A2Q8N612 972 aaPredicted RBP12.47□□□□□ -0.41
SUPT4H1-203ENST00000579289 SLC7A14Q8TBB6 771 aa12.47□□□□□ -0.41
SUPT4H1-203ENST00000579289 TCEAL4Q96EI5 215 aa12.47□□□□□ -0.41
SUPT4H1-203ENST00000579289 IER2Q9BTL4 223 aa12.47□□□□□ -0.41
SUPT4H1-203ENST00000579289 ZNF334Q9HCZ1 680 aaPredicted RBP12.47□□□□□ -0.41
SUPT4H1-203ENST00000579289 GDE1Q9NZC3 331 aa12.47□□□□□ -0.41
SUPT4H1-203ENST00000579289 VAV3Q9UKW4 847 aa12.47□□□□□ -0.41
SUPT4H1-203ENST00000579289 NDRG2Q9UN36 371 aaKnown RBP12.47□□□□□ -0.41
SUPT4H1-203ENST00000579289 NID2Q14112 1375 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 ZMYM2Q9UBW7 1377 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 PTGESO14684 152 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 ZBTB43O43298 467 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 KCNK5O95279 499 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 TDP2O95551 362 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 RHOP08100 348 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 ARF4P18085 180 aaPredicted RBP12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 RAP1GAPP47736 663 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 CCR3P51677 355 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 MBTD1Q05BQ5 628 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 PTGDRQ13258 359 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 SIM2Q14190 667 aaPredicted RBP12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 HSP90AA2PQ14568 343 aaPredicted RBP12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 PSMD5Q16401 504 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 ADCK5Q3MIX3 580 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 PABPC1LQ4VXU2 614 aaKnown RBP12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 FAM78AQ5JUQ0 283 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 VITQ6UXI7 678 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 PRR23BQ6ZRT6 265 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 ZSWIM3Q96MP5 696 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 TTPALQ9BTX7 342 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 LSM14BQ9BX40 385 aaKnown RBP12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 ANO2Q9NQ90 1003 aa12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 GCN1Q92616 2671 aaKnown RBP12.46□□□□□ -0.41
SUPT4H1-203ENST00000579289 TTLL13PA6NNM8 815 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 B4GALT5O43286 388 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 PRPF3O43395 683 aaKnown RBP12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 TOP3BO95985 862 aaKnown RBP12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 ZNF806P0C7X5 589 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 FGFR3P22607 806 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 AXLP30530 894 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 HOXA6P31267 233 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 CXCL12P48061 93 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 RCAN1P53805 252 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 PSMC5P62195 406 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 CREMQ03060 361 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 GRIK3Q13003 919 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 GRM2Q14416 872 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 FAM171A1Q5VUB5 890 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 UNQ6494/PRO21346Q6UXR6 183 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 RTL10Q7L3V2 364 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 LONP2Q86WA8 852 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 CDR2LQ86X02 465 aaPredicted RBP12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 RNF149Q8NC42 400 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 DDX1Q92499 740 aaKnown RBP12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 GATA6Q92908 595 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 RSPRY1Q96DX4 576 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 CCDC51Q96ER9 411 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 C6orf50Q9HD87 102 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 KLK14Q9P0G3 267 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 MTRRQ9UBK8 725 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 MRPS17Q9Y2R5 130 aaKnown RBP12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 ARID2Q68CP9 1835 aa12.45□□□□□ -0.42
SUPT4H1-203ENST00000579289 SF3B1O75533 1304 aaKnown RBP eCLIP12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 EML5Q05BV3 1969 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 A0A1B0GUA9 196 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 ARHGEF37A1IGU5 675 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 GOLGA8AA7E2F4 631 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 GOLGA8BA8MQT2 603 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 MAN2B1O00754 1011 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 XYLBO75191 536 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 CDC45O75419 566 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 TADA2AO75478 443 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 CNR2P34972 360 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 MLLT6P55198 1093 aaPredicted RBP12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 POU5F1BQ06416 359 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 CCDC6Q16204 474 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 STPG1Q5TH74 334 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 Q6ZS52 159 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 SPEM1Q8N4L4 309 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 ASAP3Q8TDY4 903 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 TBCKQ8TEA7 893 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 HASPINQ8TF76 798 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 PSPC1Q8WXF1 523 aaKnown RBP12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 FAM3CQ92520 227 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 ASB16Q96NS5 453 aa12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 RBM12Q9NTZ6 932 aaKnown RBP12.44□□□□□ -0.42
SUPT4H1-203ENST00000579289 SDK1Q7Z5N4 2213 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 GIPC1O14908 333 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 SLC37A4O43826 429 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 MICAL2O94851 1124 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 ABLIM3O94929 683 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 CAPNS1P04632 268 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 OR1D2P34982 312 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 PPP2R5CQ13362 524 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 TUSC3Q13454 348 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 CAPSQ13938 189 aa12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 PCBP1Q15365 356 aaKnown RBP eCLIP12.43□□□□□ -0.42
SUPT4H1-203ENST00000579289 TSGA10IPQ3SY00 556 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms