RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CPSF3Q9UKF6 684 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CARNS1A5YM72 827 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 GOLGA8IPA6NC78 632 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 GOLGA8JA6NMD2 632 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 GOLGA6L19H0YKK7 550 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TULP1O00294 542 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 STX10O60499 249 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RECQL4O94761 1208 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 UPP2O95045 317 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TPM2P07951 284 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ACOT2P49753 483 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ZNF165P49910 485 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ENPEPQ07075 957 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CCDC40Q4G0X9 1142 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TTI2Q6NXR4 508 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FILIP1Q7Z7B0 1213 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ZNF598Q86UK7 904 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 BRSK2Q8IWQ3 736 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FAM186BQ8IYM0 893 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FAM200AQ8TCP9 573 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TOP1MTQ969P6 601 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FNBP1Q96RU3 617 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SRRTQ9BXP5 876 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 IKZF4Q9H2S9 585 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ASB7Q9H672 318 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 DMAC2Q9NW81 257 aa12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-210ENST00000578733 IKBKBO14920 756 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 PRKCSHP14314 528 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ATP2A2P16615 1042 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 AKAP5P24588 427 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 EPHB4P54760 987 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SPAG1Q07617 926 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TCTN1Q2MV58 587 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 C11orf57Q6ZUT1 292 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ZC3H3Q8IXZ2 948 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CEP120Q8N960 986 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RDH13Q8NBN7 331 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MAFAQ8NHW3 353 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CACTINQ8WUQ7 758 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 VWCEQ96DN2 955 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SNX27Q96L92 541 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FBXL18Q96ME1 805 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FAM193BQ96PV7 902 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 YME1L1Q96TA2 773 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 HAPLN2Q9GZV7 340 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TMEM117Q9H0C3 514 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 THAP9Q9H5L6 903 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SPTBN5Q9NRC6 3674 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SLC38A7Q9NVC3 462 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 DERAQ9Y315 318 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 HES2Q9Y543 173 aa12.24□□□□□ -0.45
CDK5RAP3-210ENST00000578733 PRUNE2Q8WUY3 3088 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FAM189A1O60320 539 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 GJB5O95377 273 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 THP07101 528 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CXCL8P10145 99 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TNNI1P19237 187 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 EEF1GP26641 437 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MLH1P40692 756 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TNFSF9P41273 254 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 AP3M2P53677 418 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 PMS1P54277 932 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MCCD1P59942 119 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 DEFB103AP81534 67 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RNASELQ05823 741 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 GRIK3Q13003 919 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ENOX2Q16206 610 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SEZ6Q53EL9 994 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 AGMOQ6ZNB7 445 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FRMD5Q7Z6J6 570 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CREBRFQ8IUR6 639 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 AOPEPQ8N6M6 819 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 HELQQ8TDG4 1101 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 LPPQ93052 612 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ANKRD36BP1Q96IX9 119 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FAM161BQ96MY7 647 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 DUSP9Q99956 384 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CNTN3Q9P232 1028 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ARMCX3Q9UH62 379 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 INPP5FQ9Y2H2 1132 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 NFE2L3Q9Y4A8 694 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 INSL6Q9Y581 213 aa12.23□□□□□ -0.45
CDK5RAP3-210ENST00000578733 COL4A6Q14031 1691 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ARL5CA6NH57 179 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TBKBP1A7MCY6 615 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TLL1O43897 1013 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 DGKIO75912 1065 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 AKAP3O75969 853 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TNNC2P02585 160 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TMEM191BP0C7N4 346 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ATF7P17544 494 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CDK11BP21127 795 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CYP24A1Q07973 514 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 BFSP1Q12934 665 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TMEM132DQ14C87 1099 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 PSMD6Q15008 389 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms