RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 BRSK2Q8IWQ3 736 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 TDHQ8IZJ6 230 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 ABI1Q8IZP0 508 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 HELQQ8TDG4 1101 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 TOP1MTQ969P6 601 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 CCDC127Q96BQ5 260 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 SNX27Q96L92 541 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 CNOT6LQ96LI5 555 aaKnown RBP13.19□□□□□ -0.3
IFT20-207ENST00000578547 FBXL18Q96ME1 805 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 RPS6KC1Q96S38 1066 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 ELAC1Q9H777 363 aaKnown RBP13.19□□□□□ -0.3
IFT20-207ENST00000578547 RSAD1Q9HA92 442 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
IFT20-207ENST00000578547 FANCLQ9NW38 375 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 MAGEC2Q9UBF1 373 aaPredicted RBP13.19□□□□□ -0.3
IFT20-207ENST00000578547 ARL5CA6NH57 179 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 SMTNL1A8MU46 457 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 GRXCR1A8MXD5 290 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 LACTBL1A8MY62 500 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 IKBKBO14920 756 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 MEFVO15553 781 aaPredicted RBP13.18□□□□□ -0.3
IFT20-207ENST00000578547 EOMESO95936 686 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 DLATP10515 647 aaKnown RBP13.18□□□□□ -0.3
IFT20-207ENST00000578547 KRT13P13646 458 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 ATP2A2P16615 1042 aaKnown RBP13.18□□□□□ -0.3
IFT20-207ENST00000578547 NCAPHQ15003 741 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 SLC10A6Q3KNW5 377 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 PAN2Q504Q3 1202 aaKnown RBP13.18□□□□□ -0.3
IFT20-207ENST00000578547 DCAF17Q5H9S7 520 aaPredicted RBP13.18□□□□□ -0.3
IFT20-207ENST00000578547 GLRA4Q5JXX5 417 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 CLLU1OSQ5K130 101 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 TCERG1LQ5VWI1 586 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 GLB1LQ6UWU2 654 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 PHOSPHO2Q8TCD6 241 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 TMEM174Q8WUU8 243 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 GAD1Q99259 594 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 MKNK1Q9BUB5 465 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 CXCL16Q9H2A7 254 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 THAP9Q9H5L6 903 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 PDE11AQ9HCR9 933 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 UBN1Q9NPG3 1134 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 GIT1Q9Y2X7 761 aa13.18□□□□□ -0.3
IFT20-207ENST00000578547 TTC3P53804 2025 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 RALGAPA2Q2PPJ7 1873 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 TBKBP1A7MCY6 615 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 KCNJ18B7U540 433 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 GOLGA6L19H0YKK7 550 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 HOXA2O43364 376 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 IL18RAPO95256 599 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 GNA14O95837 355 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 POMCP01189 267 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 NFICP08651 508 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 TRIM49P0CI25 452 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 TRIM49CP0CI26 452 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 MTIF2P46199 727 aaKnown RBP13.17□□□□□ -0.3
IFT20-207ENST00000578547 SCNN1GP51170 649 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 AFF1P51825 1210 aaKnown RBP13.17□□□□□ -0.3
IFT20-207ENST00000578547 WNT7BP56706 349 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 TPM4P67936 248 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 BFSP1Q12934 665 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 KCNJ12Q14500 433 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 PSMD6Q15008 389 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 IQCB1Q15051 598 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 LMBRD2Q68DH5 695 aaPredicted RBP13.17□□□□□ -0.3
IFT20-207ENST00000578547 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
IFT20-207ENST00000578547 HERC6Q8IVU3 1022 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 KIF12Q96FN5 646 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 FAM84AQ96KN4 292 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 MFSD14AQ96MC6 490 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 FNBP1Q96RU3 617 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 SLC9A7Q96T83 725 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 ZBED2Q9BTP6 218 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 MMRN2Q9H8L6 949 aa13.17□□□□□ -0.3
IFT20-207ENST00000578547 ARMCX3Q9UH62 379 aaPredicted RBP13.17□□□□□ -0.3
IFT20-207ENST00000578547 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 TTC26A0AVF1 554 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 MAPK13O15264 365 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 OFD1O75665 1012 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 DGKIO75912 1065 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 GJB5O95377 273 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 VAMP7P51809 220 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 RABGGTBP53611 331 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 DLG4P78352 724 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
IFT20-207ENST00000578547 TMEM132DQ14C87 1099 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 NOMO2Q5JPE7 1267 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 JADE1Q6IE81 842 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 FRMD5Q7Z6J6 570 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 GAS2L3Q86XJ1 694 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 IRF2BP1Q8IU81 584 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 PLEKHO2Q8TD55 490 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 YME1L1Q96TA2 773 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 POP1Q99575 1024 aaKnown RBP13.16□□□□□ -0.3
IFT20-207ENST00000578547 CGRRF1Q99675 332 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 PLEKHA5Q9HAU0 1116 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms