RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 KDM7AQ6ZMT4 941 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 CNOT8Q9UFF9 292 aaKnown RBP18.84■□□□□ 0.61
ERBB2-205ENST00000578199 PTPN22Q9Y2R2 807 aa18.84■□□□□ 0.61
ERBB2-205ENST00000578199 CYP1A2P05177 515 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 MYZAPP0CAP1 466 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 KCNJ1P48048 391 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 TCEAL1Q15170 157 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 GNPTABQ3T906 1256 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 DAB2IPQ5VWQ8 1189 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 RPS6KC1Q96S38 1066 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 FMO2Q99518 471 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 RAB17Q9H0T7 212 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 NFASCO94856 1347 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 SYNGAP1Q96PV0 1343 aa18.83■□□□□ 0.61
ERBB2-205ENST00000578199 BRCA1P38398 1863 aaKnown RBP18.83■□□□□ 0.6
ERBB2-205ENST00000578199 GOLGA6L10A6NI86 522 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 LRRIQ4A6NIV6 560 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 DCDC2CA8MYV0 355 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 CFHP08603 1231 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 GARTP22102 1010 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 PTGIRP43119 386 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 HIRAP54198 1017 aaPredicted RBP18.83■□□□□ 0.6
ERBB2-205ENST00000578199 XKR3Q5GH77 459 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 TREML2Q5T2D2 321 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 UBAP2Q5T6F2 1119 aaKnown RBP18.83■□□□□ 0.6
ERBB2-205ENST00000578199 ACAD10Q6JQN1 1059 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 ANKRD35Q8N283 1001 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 ZDHHC18Q9NUE0 388 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 AFG3L2Q9Y4W6 797 aa18.83■□□□□ 0.6
ERBB2-205ENST00000578199 CLSTN1O94985 981 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 EDN1P05305 212 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 CCDC137Q6PK04 289 aaKnown RBP18.82■□□□□ 0.6
ERBB2-205ENST00000578199 FBXO25Q8TCJ0 367 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 ZNF302Q9NR11 478 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 ANKFY1Q9P2R3 1169 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 GTF3C4Q9UKN8 822 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 KIAA0391O15091 583 aaKnown RBP18.82■□□□□ 0.6
ERBB2-205ENST00000578199 DKC1O60832 514 aaKnown RBP eCLIP18.82■□□□□ 0.6
ERBB2-205ENST00000578199 PHF2O75151 1096 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 MTA2O94776 668 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 SEL1L2Q5TEA6 688 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 TDRD10Q5VZ19 366 aaKnown RBP18.82■□□□□ 0.6
ERBB2-205ENST00000578199 CRELD2Q6UXH1 353 aaPredicted RBP18.82■□□□□ 0.6
ERBB2-205ENST00000578199 LRIG3Q6UXM1 1119 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 EEPD1Q7L9B9 569 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 CDHR1Q96JP9 859 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 FNBP1Q96RU3 617 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 WNT8AQ9H1J5 351 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 HOXC10Q9NYD6 342 aa18.82■□□□□ 0.6
ERBB2-205ENST00000578199 HMGB1P1B2RPK0 211 aaPredicted RBP18.81■□□□□ 0.6
ERBB2-205ENST00000578199 EXTL3O43909 919 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 HARSP12081 509 aaKnown RBP18.81■□□□□ 0.6
ERBB2-205ENST00000578199 GLRA2P23416 452 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 GTF2H1P32780 548 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 SEC24CP53992 1094 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 BIRC3Q13489 604 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 STXBP2Q15833 593 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 CLEC16AQ2KHT3 1053 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 C15orf39Q6ZRI6 1047 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 TARS2Q9BW92 718 aaKnown RBP18.81■□□□□ 0.6
ERBB2-205ENST00000578199 R3HDMLQ9H3Y0 253 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 C1orf112Q9NSG2 853 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 AGO2Q9UKV8 859 aaKnown RBP18.81■□□□□ 0.6
ERBB2-205ENST00000578199 LCTP09848 1927 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 HLA-DRAP01903 254 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 SHBGP04278 402 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 RARAP10276 462 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 CTNNA2P26232 953 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 LSP1P33241 339 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 RPL21P46778 160 aaKnown RBP18.81■□□□□ 0.6
ERBB2-205ENST00000578199 STRN3Q13033 797 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 ZDHHC24Q6UX98 284 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 USP37Q86T82 979 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 PSPC1Q8WXF1 523 aaKnown RBP18.81■□□□□ 0.6
ERBB2-205ENST00000578199 ANAPC7Q9UJX3 599 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 PCDHA3Q9Y5H8 950 aa18.81■□□□□ 0.6
ERBB2-205ENST00000578199 POLR2AP24928 1970 aaKnown RBP18.81■□□□□ 0.6
ERBB2-205ENST00000578199 TTLL13PA6NNM8 815 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 ATP2A1O14983 1001 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 CLDN3O15551 220 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 VNN1O95497 513 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 RTP1P59025 263 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 SLC13A5Q86YT5 568 aaPredicted RBP18.8■□□□□ 0.6
ERBB2-205ENST00000578199 APOBEC3FQ8IUX4 373 aaKnown RBP18.8■□□□□ 0.6
ERBB2-205ENST00000578199 PASD1Q8IV76 773 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 FBXO40Q9UH90 709 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 NOVA2Q9UNW9 492 aaKnown RBP18.8■□□□□ 0.6
ERBB2-205ENST00000578199 MAFBQ9Y5Q3 323 aaPredicted RBP18.8■□□□□ 0.6
ERBB2-205ENST00000578199 SSC5DA1L4H1 1573 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 K7ERI5 159 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 C4BPAP04003 597 aaKnown RBP18.8■□□□□ 0.6
ERBB2-205ENST00000578199 OATP04181 439 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 SCP2P22307 547 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 RRM1P23921 792 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 GCNT1Q02742 428 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 DRP2Q13474 957 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 DHX34Q14147 1143 aaKnown RBP18.8■□□□□ 0.6
ERBB2-205ENST00000578199 CYFIP2Q96F07 1278 aa18.8■□□□□ 0.6
ERBB2-205ENST00000578199 GRHL1Q9NZI5 618 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms