RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CLSTN3Q9BQT9 956 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 TPCN1Q9ULQ1 816 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 MRPS17Q9Y2R5 130 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 PCDHGA2Q9Y5H1 932 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 MYH15Q9Y2K3 1946 aa12.4□□□□□ -0.42
SMARCE1-214ENST00000578112 KANSL1LA0AUZ9 987 aa12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 C8AP07357 584 aa12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 RPA1P27694 616 aa12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 MLLT6P55198 1093 aaPredicted RBP12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 NAB2Q15742 525 aa12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 PALB2Q86YC2 1186 aa12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 LEMD2Q8NC56 503 aa12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 RUBCNQ92622 972 aa12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 TRPV5Q9NQA5 729 aa12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 SLC38A7Q9NVC3 462 aa12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 CA14Q9ULX7 337 aa12.4□□□□□ -0.43
SMARCE1-214ENST00000578112 ARHGEF37A1IGU5 675 aa12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 LRRIQ4A6NIV6 560 aa12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 CDK11BP21127 795 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 TRAPPC10P48553 1259 aa12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 RTP2Q5QGT7 225 aa12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 C1orf228Q6PIY5 440 aa12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 NELL1Q92832 810 aa12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 SECISBP2LQ93073 1101 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 IFT74Q96LB3 600 aa12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 TIPINQ9BVW5 301 aa12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 APOL6Q9BWW8 343 aa12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 HES2Q9Y543 173 aa12.39□□□□□ -0.43
SMARCE1-214ENST00000578112 STK25O00506 426 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 PTGESO14684 152 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 USO1O60763 962 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 KINO60870 393 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 PRKCBP05771 671 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 SPATA31C1P0DKV0 1188 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 FDPSP14324 419 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 AKAP5P24588 427 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 XKR4Q5GH76 650 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 FAM171A1Q5VUB5 890 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 CLDN23Q96B33 292 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 H7C4K7 107 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 SYN3O14994 580 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 B4GALT5O43286 388 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 KIF4AO95239 1232 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 SCP2P22307 547 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 PAX3P23760 479 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 EARS2Q5JPH6 523 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 DIS3L2Q8IYB7 885 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 RSAD2Q8WXG1 361 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 TSPAN18Q96SJ8 248 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 LLPHQ9BRT6 129 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 TMEM134Q9H6X4 195 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 C17orf75Q9HAS0 396 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 TOPORSQ9NS56 1045 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 TNFSF13BQ9Y275 285 aa12.38□□□□□ -0.43
SMARCE1-214ENST00000578112 ARHGEF35A5YM69 484 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 MAN2B1O00754 1011 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 ZNF197O14709 1029 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 TBC1D4O60343 1298 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 RECQL4O94761 1208 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 GLULP15104 373 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 ATP2B1P20020 1258 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 TXKP42681 527 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 NR5A1Q13285 461 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 NSUN7Q8NE18 718 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 ELSPBP1Q96BH3 223 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 PPP1R10Q96QC0 940 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 PRR5-ARHGAP8B1AHC4 643 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 ZBTB39O15060 712 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 LILRB5O75023 590 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 RPL9P32969 192 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 GRM5P41594 1212 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.438e-8■□□□□ 8.3
SMARCE1-214ENST00000578112 ARHGAP8P85298 464 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 PPP2R5DQ14738 602 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 SLC44A4Q53GD3 710 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 TPGS2Q68CL5 300 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 SLC8B1Q6J4K2 584 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 GRASPQ7Z6J2 395 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 SKAP1Q86WV1 359 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 CATSPER3Q86XQ3 398 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 KCNG4Q8TDN1 519 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 FGF13Q92913 245 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 KCNN1Q92952 543 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 E2F7Q96AV8 911 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 FOXP1Q9H334 677 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 SNTG2Q9NY99 539 aa12.37□□□□□ -0.43
SMARCE1-214ENST00000578112 LAMTOR5O43504 91 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 OR52Z1P0C646 297 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 YARSP54577 528 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 PABPC1LQ4VXU2 614 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 PRSS55Q6UWB4 352 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 LTB4R2Q9NPC1 389 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 PRMT8Q9NR22 394 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 ZSCAN32Q9NX65 697 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms