RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 ABCB4P21439 1286 aa29.82■■■□□ 2.36
LIMD2-203ENST00000578067 PAFAH1B1P43034 410 aa29.82■■■□□ 2.36
LIMD2-203ENST00000578067 MCL1Q07820 350 aa29.82■■■□□ 2.36
LIMD2-203ENST00000578067 ACVR2BQ13705 512 aa29.82■■■□□ 2.36
LIMD2-203ENST00000578067 BRSK2Q8IWQ3 736 aa29.82■■■□□ 2.36
LIMD2-203ENST00000578067 ARID3AQ99856 593 aa29.82■■■□□ 2.36
LIMD2-203ENST00000578067 C16orf70Q9BSU1 422 aa29.82■■■□□ 2.36
LIMD2-203ENST00000578067 ISCUQ9H1K1 167 aa29.82■■■□□ 2.36
LIMD2-203ENST00000578067 CPA4Q9UI42 421 aa29.82■■■□□ 2.36
LIMD2-203ENST00000578067 CCDC151A5D8V7 595 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 OGTO15294 1046 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 VNN1O95497 513 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 SMPD1P17405 629 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 PTENP60484 403 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 SLC35G2Q8TBE7 412 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 PACSIN2Q9UNF0 486 aaPredicted RBP29.81■■■□□ 2.36
LIMD2-203ENST00000578067 ABLIM1O14639 778 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 ZNF286BP0CG31 522 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 CYP11B1P15538 503 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 IQSEC1Q6DN90 963 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 TSHZ1Q6ZSZ6 1077 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 SLFN11Q7Z7L1 901 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 SYCE1Q8N0S2 351 aa29.81■■■□□ 2.36
LIMD2-203ENST00000578067 ZHX1Q9UKY1 873 aaPredicted RBP29.81■■■□□ 2.36
LIMD2-203ENST00000578067 COL1A2P08123 1366 aa29.8■■■□□ 2.36
LIMD2-203ENST00000578067 INO80B-WBP1J3KQ70 363 aa29.8■■■□□ 2.36
LIMD2-203ENST00000578067 TNFSF9P41273 254 aa29.8■■■□□ 2.36
LIMD2-203ENST00000578067 GRM1Q13255 1194 aa29.8■■■□□ 2.36
LIMD2-203ENST00000578067 RPS6KA1Q15418 735 aa29.8■■■□□ 2.36
LIMD2-203ENST00000578067 TAF3Q5VWG9 929 aa29.8■■■□□ 2.36
LIMD2-203ENST00000578067 CC2D1AQ6P1N0 951 aaPredicted RBP29.8■■■□□ 2.36
LIMD2-203ENST00000578067 RASAL3Q86YV0 1011 aa29.8■■■□□ 2.36
LIMD2-203ENST00000578067 MSL3Q8N5Y2 521 aaKnown RBP29.8■■■□□ 2.36
LIMD2-203ENST00000578067 DHX38Q92620 1227 aaKnown RBP29.8■■■□□ 2.36
LIMD2-203ENST00000578067 ZNF668Q96K58 619 aaPredicted RBP29.8■■■□□ 2.36
LIMD2-203ENST00000578067 NFKBIZQ9BYH8 718 aa29.8■■■□□ 2.36
LIMD2-203ENST00000578067 INO80BQ9C086 356 aaPredicted RBP29.8■■■□□ 2.36
LIMD2-203ENST00000578067 THAP2Q9H0W7 228 aa29.8■■■□□ 2.36
LIMD2-203ENST00000578067 RTN2O75298 545 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 ZRANB2O95218 330 aaKnown RBP eCLIP29.79■■■□□ 2.36
LIMD2-203ENST00000578067 PDE6CP51160 858 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 ZNF157P51786 506 aaPredicted RBP29.79■■■□□ 2.36
LIMD2-203ENST00000578067 AP3M2P53677 418 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 PCDHB18PQ96TA0 734 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 ACP6Q9NPH0 428 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 H3BRB1 525 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 FTLP02792 175 aaPredicted RBP29.79■■■□□ 2.36
LIMD2-203ENST00000578067 GZMAP12544 262 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 PROZP22891 400 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 POU5F1BQ06416 359 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 C2orf54Q08AI8 447 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 CFAP221Q4G0U5 840 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 MPZL3Q6UWV2 235 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 LINC01465Q8N7H1 131 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 SPATA4Q8NEY3 305 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 TAF4BQ92750 862 aa29.79■■■□□ 2.36
LIMD2-203ENST00000578067 TUT1Q9H6E5 874 aaKnown RBP29.79■■■□□ 2.36
LIMD2-203ENST00000578067 KIF4AO95239 1232 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 KRT5P13647 590 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 CDR2Q01850 454 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 MBTD1Q05BQ5 628 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 ATF7IP2Q5U623 682 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 MMGT1Q8N4V1 131 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 OR6J1Q8NGC5 347 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 OR5B17Q8NGF7 314 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 ARHGEF26Q96DR7 871 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 GOLPH3Q9H4A6 298 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 PTPRHQ9HD43 1115 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 ARFGAP3Q9NP61 516 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 OSGEPQ9NPF4 335 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 CPSF3Q9UKF6 684 aaKnown RBP29.78■■■□□ 2.36
LIMD2-203ENST00000578067 ZNF236Q9UL36 1845 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 MANSC4A6NHS7 340 aaPredicted RBP29.78■■■□□ 2.36
LIMD2-203ENST00000578067 IGF2BP3O00425 579 aaKnown RBP eCLIP29.78■■■□□ 2.36
LIMD2-203ENST00000578067 MMEP08473 750 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 DNA2P51530 1060 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 FMO1Q01740 532 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 CHADLQ6NUI6 762 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 DAAM2Q86T65 1068 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 WDR49Q8IV35 697 aa29.78■■■□□ 2.36
LIMD2-203ENST00000578067 ZCCHC17Q9NP64 241 aaKnown RBP29.78■■■□□ 2.36
LIMD2-203ENST00000578067 CES2O00748 559 aa29.77■■■□□ 2.36
LIMD2-203ENST00000578067 MMP3P08254 477 aa29.77■■■□□ 2.36
LIMD2-203ENST00000578067 HOXD8P13378 290 aaPredicted RBP29.77■■■□□ 2.36
LIMD2-203ENST00000578067 PHKA2P46019 1235 aa29.77■■■□□ 2.36
LIMD2-203ENST00000578067 PEX26Q7Z412 305 aa29.77■■■□□ 2.36
LIMD2-203ENST00000578067 EHD2Q9NZN4 543 aa29.77■■■□□ 2.36
LIMD2-203ENST00000578067 PHACTR2O75167 634 aa29.76■■■□□ 2.36
LIMD2-203ENST00000578067 SEC31AO94979 1220 aaKnown RBP29.76■■■□□ 2.36
LIMD2-203ENST00000578067 SURF1Q15526 300 aa29.76■■■□□ 2.36
LIMD2-203ENST00000578067 MORN1Q5T089 497 aa29.76■■■□□ 2.36
LIMD2-203ENST00000578067 WDR93Q6P2C0 686 aa29.76■■■□□ 2.36
LIMD2-203ENST00000578067 RHOT2Q8IXI1 618 aa29.76■■■□□ 2.36
LIMD2-203ENST00000578067 HNRNPLLQ8WVV9 542 aaKnown RBP29.76■■■□□ 2.36
LIMD2-203ENST00000578067 MS4A14Q96JA4 679 aa29.76■■■□□ 2.36
LIMD2-203ENST00000578067 MINDY3Q9H8M7 445 aa29.76■■■□□ 2.36
LIMD2-203ENST00000578067 PRMT7Q9NVM4 692 aaPredicted RBP29.76■■■□□ 2.36
LIMD2-203ENST00000578067 SMARCAL1Q9NZC9 954 aa29.76■■■□□ 2.36
LIMD2-203ENST00000578067 STXBP5LQ9Y2K9 1186 aa29.76■■■□□ 2.36
LIMD2-203ENST00000578067 TARSL2A2RTX5 802 aaKnown RBP29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms