RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 SDC4P31431 198 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 STX1BP61266 288 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 EPC2Q52LR7 807 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 C1orf146Q5VVC0 180 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 SCFD1Q8WVM8 642 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 TTC1Q99614 292 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 NCAPGQ9BPX3 1015 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 SMYD3Q9H7B4 428 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 CYP26B1Q9NR63 512 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 LCMT1Q9UIC8 334 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 MSH4O15457 936 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 CDH6P55285 790 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 DUOXA2Q1HG44 320 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 EAPPQ56P03 285 aaPredicted RBP11.55□□□□□ -0.56
RNF43-203ENST00000577716 FAM102AQ5T9C2 384 aaPredicted RBP11.55□□□□□ -0.56
RNF43-203ENST00000577716 DNAAF5Q86Y56 855 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 SGSM3Q96HU1 749 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 FAM167AQ96KS9 214 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 WRNIP1Q96S55 665 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 RUSC1Q9BVN2 902 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 VPS11Q9H270 941 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 SLC40A1Q9NP59 571 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 DDX56Q9NY93 547 aaKnown RBP11.55□□□□□ -0.56
RNF43-203ENST00000577716 M0QYV0 167 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 FOXP2O15409 715 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 DGAT1O75907 488 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 Q3C1V9 767 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 ZNF571Q7Z3V5 609 aaPredicted RBP11.55□□□□□ -0.56
RNF43-203ENST00000577716 NUDCD3Q8IVD9 361 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 FBXO25Q8TCJ0 367 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 TLR10Q9BXR5 811 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 ROPN1BQ9BZX4 212 aaPredicted RBP11.55□□□□□ -0.56
RNF43-203ENST00000577716 ROPN1Q9HAT0 212 aaPredicted RBP11.55□□□□□ -0.56
RNF43-203ENST00000577716 PCDHB2Q9Y5E7 798 aa11.55□□□□□ -0.56
RNF43-203ENST00000577716 CCDC195A0A1B0GUA6 201 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 DIAPH2O60879 1101 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 GPC3P51654 580 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 NPEPPSP55786 919 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 CCNA1P78396 465 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 STRIP1Q5VSL9 837 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 SLC13A5Q86YT5 568 aaPredicted RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 ERP27Q96DN0 273 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 POLR3CQ9BUI4 534 aaPredicted RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 FAF1Q9UNN5 650 aaPredicted RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 NEU2Q9Y3R4 380 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 FAM47DPA6NHR8 397 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 AKAP3O75969 853 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 NOP14P78316 857 aaKnown RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 PDE1CQ14123 709 aaPredicted RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 PLA2G4FQ68DD2 849 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 KIF2BQ8N4N8 673 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 PIP4K2CQ8TBX8 421 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 SPDL1Q96EA4 605 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 SERPINI1Q99574 410 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 EFHD1Q9BUP0 239 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 MRPL4Q9BYD3 311 aaKnown RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 FAM49AQ9H0Q0 323 aaPredicted RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 IL17RBQ9NRM6 502 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 SMG5Q9UPR3 1016 aaKnown RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 SMIM22K7EJ46 135 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 MAP2K7O14733 419 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 KRT3P12035 628 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 COILP38432 576 aaPredicted RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 ITGA8P53708 1063 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 THOC5Q13769 683 aaKnown RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 ARMCX2Q7L311 632 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 RIT2Q99578 217 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 TIPINQ9BVW5 301 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 OSGEPQ9NPF4 335 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 HOXC10Q9NYD6 342 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 KLHL8Q9P2G9 620 aaPredicted RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 IPO11Q9UI26 975 aaKnown RBP11.54□□□□□ -0.56
RNF43-203ENST00000577716 GTF3C4Q9UKN8 822 aa11.54□□□□□ -0.56
RNF43-203ENST00000577716 TTC4O95801 387 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 ROR1Q01973 937 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 MTM1Q13496 603 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 CATSPER4Q7RTX7 472 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 RAPGEF5Q92565 580 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 LBHD1Q9BQE6 289 aaPredicted RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 OSBPL1AQ9BXW6 950 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 SPC25Q9HBM1 224 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 TCHHQ07283 1943 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 FER1L4A9Z1Z3 1794 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 ERFP50548 548 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 EIF3EP60228 445 aaKnown RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 GIT2Q14161 759 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 MEI1Q5TIA1 1274 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 RFX8Q6ZV50 586 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 LRRC34Q8IZ02 419 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 VGLL2Q8N8G2 317 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 PI4K2AQ9BTU6 479 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 VCPKMTQ9H867 229 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 P4HA2O15460 535 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 MAGEA4P43358 317 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 BAATQ14032 418 aaPredicted RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 SMAD1Q15797 465 aaKnown RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 MEA1Q16626 185 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 WDR72Q3MJ13 1102 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 KRT80Q6KB66 452 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 RCOR2Q8IZ40 523 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms