RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 SMC3Q9UQE7 1217 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 GDAQ9Y2T3 454 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 PP2D1A8MPX8 630 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 KIF4AO95239 1232 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 BRD1O95696 1058 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 GUCY2CP25092 1073 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 AVPR2P30518 371 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 GRM5P41594 1212 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 SMTNP53814 917 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 IL17AQ16552 155 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 FAM171A1Q5VUB5 890 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 LILRA6Q6PI73 481 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 DCLRE1AQ6PJP8 1040 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.4■□□□□ 0.22
MKS1-205ENST00000577315 PALB2Q86YC2 1186 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 SYT2Q8N9I0 419 aaPredicted RBP16.4■□□□□ 0.22
MKS1-205ENST00000577315 SMG7Q92540 1137 aaKnown RBP16.4■□□□□ 0.22
MKS1-205ENST00000577315 B3GALT6Q96L58 329 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 AK8Q96MA6 479 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 ACO2Q99798 780 aaKnown RBP16.4■□□□□ 0.22
MKS1-205ENST00000577315 PAAF1Q9BRP4 392 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 PIDD1Q9HB75 910 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 POLD4Q9HCU8 107 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 SLC38A7Q9NVC3 462 aa16.4■□□□□ 0.22
MKS1-205ENST00000577315 TRAPPC3O43617 180 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 BMP15O95972 392 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 CDC25AP30304 524 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 STRN3Q13033 797 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 TDGQ13569 410 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 PSMD5Q16401 504 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 ZNF568Q3ZCX4 644 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 RTP2Q5QGT7 225 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 LARP1BQ659C4 914 aaKnown RBP16.39■□□□□ 0.21
MKS1-205ENST00000577315 CEP57Q86XR8 500 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 DAW1Q8N136 415 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 SPIRE2Q8WWL2 714 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 NXPE3Q969Y0 559 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 DDX27Q96GQ7 796 aaKnown RBP16.39■□□□□ 0.21
MKS1-205ENST00000577315 PPP1R10Q96QC0 940 aaKnown RBP16.39■□□□□ 0.21
MKS1-205ENST00000577315 RUSC1Q9BVN2 902 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 PRKD2Q9BZL6 878 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 PTPRHQ9HD43 1115 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 USP20Q9Y2K6 914 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 CLUHO75153 1309 aa16.39■□□□□ 0.21
MKS1-205ENST00000577315 VWA3AA6NCI4 1184 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 H0YCG3 227 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 ZMYND10O75800 440 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 ASGR2P07307 311 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 MCF2P10911 925 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 GBP2P32456 591 aaPredicted RBP16.38■□□□□ 0.21
MKS1-205ENST00000577315 MAPK7Q13164 816 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 ZRSR1Q15695 479 aaKnown RBP16.38■□□□□ 0.21
MKS1-205ENST00000577315 XKR4Q5GH76 650 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 PRSS55Q6UWB4 352 aaPredicted RBP16.38■□□□□ 0.21
MKS1-205ENST00000577315 RTL10Q7L3V2 364 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 KCNK18Q7Z418 384 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 GLYCTKQ8IVS8 523 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 LNX1Q8TBB1 728 aaPredicted RBP16.38■□□□□ 0.21
MKS1-205ENST00000577315 HASPINQ8TF76 798 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 TBC1D32Q96NH3 1257 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 ACAP3Q96P50 834 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 TCHPQ9BT92 498 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 CDT1Q9H211 546 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.38■□□□□ 0.21
MKS1-205ENST00000577315 EPS15L1Q9UBC2 864 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 CACNG4Q9UBN1 327 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 FBXW11Q9UKB1 542 aa16.38■□□□□ 0.21
MKS1-205ENST00000577315 RFPL2O75678 378 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 B3GAT3O94766 335 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 HNRNPA1P09651 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
MKS1-205ENST00000577315 SPATA31D3P0C874 917 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 PLS3P13797 630 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 RPL17P18621 184 aaKnown RBP16.37■□□□□ 0.21
MKS1-205ENST00000577315 SCP2P22307 547 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 PROZP22891 400 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 HOXA9P31269 272 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 LIN9Q5TKA1 542 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 MPZL3Q6UWV2 235 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 SPATA31D4Q6ZUB0 917 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 BRAPQ7Z569 592 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 ALYREFQ86V81 257 aaKnown RBP16.37■□□□□ 0.21
MKS1-205ENST00000577315 PRSS33Q8NF86 280 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 ZNF707Q96C28 371 aaPredicted RBP16.37■□□□□ 0.21
MKS1-205ENST00000577315 CALML4Q96GE6 196 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 PNMA5Q96PV4 448 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 CLSTN3Q9BQT9 956 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 KCNK12Q9HB15 430 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 LARSQ9P2J5 1176 aaKnown RBP16.37■□□□□ 0.21
MKS1-205ENST00000577315 DUSP12Q9UNI6 340 aa16.37■□□□□ 0.21
MKS1-205ENST00000577315 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.37■□□□□ 0.21
MKS1-205ENST00000577315 ZFP37Q9Y6Q3 630 aaPredicted RBP16.37■□□□□ 0.21
MKS1-205ENST00000577315 CACNA1HO95180 2353 aa16.36■□□□□ 0.21
MKS1-205ENST00000577315 SMIM28A0A1B0GU29 152 aa16.36■□□□□ 0.21
MKS1-205ENST00000577315 SLC16A4O15374 487 aa16.36■□□□□ 0.21
MKS1-205ENST00000577315 TOM1L1O75674 476 aa16.36■□□□□ 0.21
MKS1-205ENST00000577315 CD2BP2O95400 341 aaKnown RBP16.36■□□□□ 0.21
MKS1-205ENST00000577315 PLA2G4BP0C869 781 aa16.36■□□□□ 0.21
MKS1-205ENST00000577315 FGFR3P22607 806 aa16.36■□□□□ 0.21
MKS1-205ENST00000577315 UBA7P41226 1012 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms