RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 ATXN1P54253 815 aaKnown RBP14.79□□□□□ -0.04
COPS3-214ENST00000577246 NTHL1P78549 312 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 OTOGLQ3ZCN5 2332 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.79□□□□□ -0.04
COPS3-214ENST00000577246 RUFY3Q7L099 469 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 ZBTB8OSQ8IWT0 167 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 NPAS3Q8IXF0 933 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 ITFG1Q8TB96 612 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 ASAP3Q8TDY4 903 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 HASPINQ8TF76 798 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 RABGGTAQ92696 567 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 NELL1Q92832 810 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 KXD1Q9BQD3 176 aa14.79□□□□□ -0.04
COPS3-214ENST00000577246 MTF2Q9Y483 593 aaPredicted RBP14.79□□□□□ -0.04
COPS3-214ENST00000577246 CASTOR2A6NHX0 329 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 N4BP3O15049 544 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 ZBTB39O15060 712 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 B4GALT5O43286 388 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 SLITRK3O94933 977 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 GLRA2P23416 452 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 ADCY1Q08828 1119 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 SPIRE1Q08AE8 756 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 RAB33AQ14088 237 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 TMEM132AQ24JP5 1023 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 PPP4R3CPQ6ZMV5 832 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 PIK3AP1Q6ZUJ8 805 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 CENPQQ7L2Z9 268 aaPredicted RBP14.78□□□□□ -0.04
COPS3-214ENST00000577246 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 DNASE1L2Q92874 299 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 EIF2AK1Q9BQI3 630 aaKnown RBP14.78□□□□□ -0.04
COPS3-214ENST00000577246 ADPGKQ9BRR6 497 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 POLR3FQ9H1D9 316 aaPredicted RBP14.78□□□□□ -0.04
COPS3-214ENST00000577246 PRMT8Q9NR22 394 aaPredicted RBP14.78□□□□□ -0.04
COPS3-214ENST00000577246 KCNJ14Q9UNX9 436 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 MRPS23Q9Y3D9 190 aaKnown RBP14.78□□□□□ -0.04
COPS3-214ENST00000577246 CYP46A1Q9Y6A2 500 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 DOCK8Q8NF50 2099 aa14.78□□□□□ -0.04
COPS3-214ENST00000577246 LRRIQ4A6NIV6 560 aa14.77□□□□□ -0.05
COPS3-214ENST00000577246 MAN2B1O00754 1011 aa14.77□□□□□ -0.05
COPS3-214ENST00000577246 TRAPPC3O43617 180 aa14.77□□□□□ -0.05
COPS3-214ENST00000577246 CD72P21854 359 aa14.77□□□□□ -0.05
COPS3-214ENST00000577246 TARSP26639 723 aaKnown RBP14.77□□□□□ -0.05
COPS3-214ENST00000577246 OR1D2P34982 312 aa14.77□□□□□ -0.05
COPS3-214ENST00000577246 TOB2Q14106 344 aaPredicted RBP14.77□□□□□ -0.05
COPS3-214ENST00000577246 CDR2LQ86X02 465 aaPredicted RBP14.77□□□□□ -0.05
COPS3-214ENST00000577246 PAAF1Q9BRP4 392 aa14.77□□□□□ -0.05
COPS3-214ENST00000577246 C2orf40Q9H1Z8 148 aa14.77□□□□□ -0.05
COPS3-214ENST00000577246 BRMS1Q9HCU9 246 aa14.77□□□□□ -0.05
COPS3-214ENST00000577246 AVENQ9NQS1 362 aaPredicted RBP14.77□□□□□ -0.05
COPS3-214ENST00000577246 MTRRQ9UBK8 725 aa14.77□□□□□ -0.05
COPS3-214ENST00000577246 PCDHA12Q9UN75 941 aa14.77□□□□□ -0.05
COPS3-214ENST00000577246 FANCMQ8IYD8 2048 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 NCOR2Q9Y618 2525 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 WDR87Q6ZQQ6 2873 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 FRYLO94915 3013 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 TMEM189-UBE2V1I3L0A0 370 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 XRCC6P12956 609 aaKnown RBP eCLIP14.76□□□□□ -0.05
COPS3-214ENST00000577246 RBM25P49756 843 aaKnown RBP14.76□□□□□ -0.05
COPS3-214ENST00000577246 RARRES1P49788 294 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 FAM187BQ17R55 369 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 ANKS3Q6ZW76 656 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 MCPH1Q8NEM0 835 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 ELSPBP1Q96BH3 223 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 AIFM3Q96NN9 605 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 HSD17B14Q9BPX1 270 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 ZSWIM6Q9HCJ5 1215 aa14.76□□□□□ -0.05
COPS3-214ENST00000577246 DNMT3BQ9UBC3 853 aaKnown RBP14.76□□□□□ -0.05
COPS3-214ENST00000577246 STK36Q9NRP7 1315 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 TDRD15B5MCY1 1934 aaKnown RBP14.75□□□□□ -0.05
COPS3-214ENST00000577246 MTCL1Q9Y4B5 1905 aaKnown RBP14.75□□□□□ -0.05
COPS3-214ENST00000577246 PTGESO14684 152 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 USO1O60763 962 aaKnown RBP14.75□□□□□ -0.05
COPS3-214ENST00000577246 LRP3O75074 770 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 KRT37O76014 449 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 RECQL4O94761 1208 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 LRG1P02750 347 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 RHOP08100 348 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 FGFR3P22607 806 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 STK3Q13188 491 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 MAPK6Q16659 721 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 CDCA2Q69YH5 1023 aaPredicted RBP14.75□□□□□ -0.05
COPS3-214ENST00000577246 LAIR1Q6GTX8 287 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 MAMSTRQ6ZN01 415 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 APBB1IPQ7Z5R6 666 aaPredicted RBP14.75□□□□□ -0.05
COPS3-214ENST00000577246 CELF5Q8N6W0 485 aaKnown RBP14.75□□□□□ -0.05
COPS3-214ENST00000577246 NETO1Q8TDF5 533 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 ING5Q8WYH8 240 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 WASF1Q92558 559 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 UROC1Q96N76 676 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 HEBP1Q9NRV9 189 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 HCFC1R1Q9NWW0 138 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 CACNG4Q9UBN1 327 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 BACE2Q9Y5Z0 518 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 CDY1Q9Y6F8 540 aa14.75□□□□□ -0.05
COPS3-214ENST00000577246 CEP250Q9BV73 2442 aa14.74□□□□□ -0.05
COPS3-214ENST00000577246 ZNF197O14709 1029 aa14.74□□□□□ -0.05
COPS3-214ENST00000577246 ADAM12O43184 909 aa14.74□□□□□ -0.05
COPS3-214ENST00000577246 EPB41L2O43491 1005 aaKnown RBP14.74□□□□□ -0.05
COPS3-214ENST00000577246 FOXD2O60548 495 aaPredicted RBP14.74□□□□□ -0.05
COPS3-214ENST00000577246 B3GAT3O94766 335 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms