RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 DLG4P78352 724 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 TFAMQ00059 246 aaKnown RBP17.87■□□□□ 0.45
ERCC4-208ENST00000576348 BIRC3Q13489 604 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 DSC3Q14574 896 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.87■□□□□ 0.45
ERCC4-208ENST00000576348 TMEM192Q8IY95 271 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 TMEM199Q8N511 208 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 C1orf112Q9NSG2 853 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 R3HCC1Q9Y3T6 440 aaKnown RBP17.87■□□□□ 0.45
ERCC4-208ENST00000576348 HES2Q9Y543 173 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 LACTBL1A8MY62 500 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 MGEA5O60502 916 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 TPM1P09493 284 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 AKAP5P24588 427 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 CDC25BP30305 580 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 SYCP1Q15431 976 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 PLEKHG4Q58EX7 1191 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 KRT39Q6A163 491 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 GBP6Q6ZN66 633 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 TMC6Q7Z403 805 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 WDR49Q8IV35 697 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 C7orf61Q8IZ16 206 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 DBF4BQ8NFT6 615 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 CACTINQ8WUQ7 758 aaKnown RBP17.86■□□□□ 0.45
ERCC4-208ENST00000576348 ANKRD36BP1Q96IX9 119 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 POP1Q99575 1024 aaKnown RBP17.86■□□□□ 0.45
ERCC4-208ENST00000576348 ASB7Q9H672 318 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 PLEKHA5Q9HAU0 1116 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 TMEM8AQ9HCN3 771 aa17.86■□□□□ 0.45
ERCC4-208ENST00000576348 TRIM43BA6NCK2 446 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 P4HA2O15460 535 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 PTMAP06454 111 aaKnown RBP17.85■□□□□ 0.45
ERCC4-208ENST00000576348 KIAA0100Q14667 2235 aaKnown RBP17.85■□□□□ 0.45
ERCC4-208ENST00000576348 TMEM132DQ14C87 1099 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 DUOXA2Q1HG44 320 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 LMBRD2Q68DH5 695 aaPredicted RBP17.85■□□□□ 0.45
ERCC4-208ENST00000576348 SLC24A5Q71RS6 500 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 PPFIBP1Q86W92 1011 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 SMG8Q8ND04 991 aaKnown RBP17.85■□□□□ 0.45
ERCC4-208ENST00000576348 PLEKHO2Q8TD55 490 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 TRIM43Q96BQ3 446 aaPredicted RBP17.85■□□□□ 0.45
ERCC4-208ENST00000576348 KIF12Q96FN5 646 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 SNX27Q96L92 541 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 RPS6KC1Q96S38 1066 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 CRACR2AQ9BSW2 395 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 TRAIPQ9BWF2 469 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 UBN1Q9NPG3 1134 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 RGS18Q9NS28 235 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 INTS13Q9NVM9 706 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 RNF216Q9NWF9 866 aaPredicted RBP17.85■□□□□ 0.45
ERCC4-208ENST00000576348 KLK14Q9P0G3 267 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 GCNT4Q9P109 453 aa17.85■□□□□ 0.45
ERCC4-208ENST00000576348 A0A0U1RQF3 1178 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 A0A1W2PQC6 194 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 XPOTO43592 962 aaKnown RBP17.84■□□□□ 0.45
ERCC4-208ENST00000576348 CXCL10P02778 98 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 PPP3CAQ08209 521 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 CCDC173Q0VFZ6 552 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 EXOC3L4Q17RC7 722 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 SLC10A6Q3KNW5 377 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 SPECC1LQ69YQ0 1117 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 JADE1Q6IE81 842 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 MFSD5Q6N075 450 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 CNKSR3Q6P9H4 555 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 ECHDC2Q86YB7 292 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 VSTM4Q8IW00 320 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 RPUSD2Q8IZ73 545 aaKnown RBP17.84■□□□□ 0.45
ERCC4-208ENST00000576348 TNS4Q8IZW8 715 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 SPC24Q8NBT2 197 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 CCDC150Q8NCX0 1101 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 LSM14BQ9BX40 385 aaKnown RBP17.84■□□□□ 0.45
ERCC4-208ENST00000576348 TSPYL2Q9H2G4 693 aaPredicted RBP17.84■□□□□ 0.45
ERCC4-208ENST00000576348 LRFN2Q9ULH4 789 aa17.84■□□□□ 0.45
ERCC4-208ENST00000576348 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.84■□□□□ 0.45
ERCC4-208ENST00000576348 TTC26A0AVF1 554 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 GTPBP10A4D1E9 387 aaKnown RBP17.83■□□□□ 0.44
ERCC4-208ENST00000576348 EVI5O60447 810 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 ZNF623O75123 536 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 NFICP08651 508 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 PIK3CAP42336 1068 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 TRPC3Q13507 836 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 IKBKEQ14164 716 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 PTPN21Q16825 1174 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 CBWD6Q4V339 395 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 CBWD3Q5JTY5 395 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 CBWD5Q5RIA9 395 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 C1orf220Q5T0J3 134 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 MRPL10Q7Z7H8 261 aaKnown RBP17.83■□□□□ 0.44
ERCC4-208ENST00000576348 NT5DC4Q86YG4 428 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 NEK11Q8NG66 645 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 LPPQ93052 612 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 ERGIC2Q96RQ1 377 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 TSPAN18Q96SJ8 248 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 TMEM117Q9H0C3 514 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 RSAD1Q9HA92 442 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 GIT1Q9Y2X7 761 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 DERAQ9Y315 318 aa17.83■□□□□ 0.44
ERCC4-208ENST00000576348 ACTN1P12814 892 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 TRIM21P19474 475 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms