RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 CNTN3Q9P232 1028 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 ANKFY1Q9P2R3 1169 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 EXOC7Q9UPT5 735 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 A0A0B4J269 797 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 PVALEFA0A1B0GWK0 134 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 HIDE1A8MVS5 230 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 OGTO15294 1046 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 SOD2P04179 222 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 MYL1P05976 194 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 ADRB2P07550 413 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 BMP1P13497 986 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 LTBRP36941 435 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 TFF2Q03403 129 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 KCNC3Q14003 757 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 HSP90AA2PQ14568 343 aaPredicted RBP14.83□□□□□ -0.04
CIITA-210ENST00000575513 POSTNQ15063 836 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 ZC2HC1CQ53FD0 456 aaPredicted RBP14.83□□□□□ -0.04
CIITA-210ENST00000575513 L1TD1Q5T7N2 865 aaKnown RBP14.83□□□□□ -0.04
CIITA-210ENST00000575513 PLPP4Q5VZY2 271 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 STXBP4Q6ZWJ1 553 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 CEP57L1Q8IYX8 460 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 CEP120Q8N960 986 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 DDX27Q96GQ7 796 aaKnown RBP14.83□□□□□ -0.04
CIITA-210ENST00000575513 SNX27Q96L92 541 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 ACCSQ96QU6 501 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 VN1R3Q9BXE9 311 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 HAPLN2Q9GZV7 340 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 IGFLR1Q9H665 355 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 CLDND1Q9NY35 253 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 ADAM28Q9UKQ2 775 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 HPSEQ9Y251 543 aa14.83□□□□□ -0.04
CIITA-210ENST00000575513 PRG3Q9Y2Y8 225 aaPredicted RBP14.83□□□□□ -0.04
CIITA-210ENST00000575513 TMEM189-UBE2V1I3L0A0 370 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 FAM189A1O60320 539 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 LILRB3O75022 631 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 C1RP00736 705 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 SRGAP2BP0DMP2 458 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 KCNA5P22460 613 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 MATR3P43243 847 aaKnown RBP eCLIP14.82□□□□□ -0.04
CIITA-210ENST00000575513 OSTNP61366 133 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 SLC10A6Q3KNW5 377 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 SLC39A4Q6P5W5 647 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 DCLRE1AQ6PJP8 1040 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 RBM23Q86U06 439 aaKnown RBP14.82□□□□□ -0.04
CIITA-210ENST00000575513 CD302Q8IX05 232 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 STAMQ92783 540 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 CHAMP1Q96JM3 812 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 HERC2P3Q9BVR0 1158 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 CXCL16Q9H2A7 254 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 TMEM206Q9H813 350 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 MRPL17Q9NRX2 175 aaKnown RBP14.82□□□□□ -0.04
CIITA-210ENST00000575513 CHST7Q9NS84 486 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 PCDHGC5Q9Y5F6 944 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 MYH11P35749 1972 aa14.82□□□□□ -0.04
CIITA-210ENST00000575513 BRWD1Q9NSI6 2320 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 PLXNA4Q9HCM2 1894 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 A0A1B0GVL5 298 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 TTC26A0AVF1 554 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 PER2O15055 1255 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 ACTN4O43707 911 aaKnown RBP14.81□□□□□ -0.04
CIITA-210ENST00000575513 TADA2AO75478 443 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 GCNT3O95395 438 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 PFKFB1P16118 471 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 RPL9P32969 192 aaKnown RBP14.81□□□□□ -0.04
CIITA-210ENST00000575513 GTF2F1P35269 517 aaKnown RBP eCLIP14.81□□□□□ -0.04
CIITA-210ENST00000575513 ASIC1P78348 528 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 DSG1Q02413 1049 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 EHHADHQ08426 723 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 ELAVL2Q12926 359 aaKnown RBP14.81□□□□□ -0.04
CIITA-210ENST00000575513 COASYQ13057 564 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 PTPN14Q15678 1187 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 UPP1Q16831 310 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 USP41Q3LFD5 358 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 KIAA0319Q5VV43 1072 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 UNC13DQ70J99 1090 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 PPFIBP1Q86W92 1011 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.81□□□□□ -0.04
CIITA-210ENST00000575513 MSTO1Q9BUK6 570 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 EMILIN2Q9BXX0 1053 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 FAM50BQ9Y247 325 aa14.81□□□□□ -0.04
CIITA-210ENST00000575513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.8□□□□□ -0.04
CIITA-210ENST00000575513 GRXCR2A6NFK2 248 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 CASTOR2A6NHX0 329 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 ANKRD63C9JTQ0 380 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 EIF3DO15371 548 aaKnown RBP eCLIP14.8□□□□□ -0.04
CIITA-210ENST00000575513 CLASP2O75122 1294 aaKnown RBP14.8□□□□□ -0.04
CIITA-210ENST00000575513 CSPG5O95196 566 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 URODP06132 367 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 HARSP12081 509 aaKnown RBP14.8□□□□□ -0.04
CIITA-210ENST00000575513 HOXB8P17481 243 aaPredicted RBP14.8□□□□□ -0.04
CIITA-210ENST00000575513 CYP3A5P20815 502 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 SYKP43405 635 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 NDUFV1P49821 464 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 FUT10Q6P4F1 479 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 TMEM87AQ8NBN3 555 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 PAGE5Q96GU1 130 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 MSLNLQ96KJ4 702 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 ZMAT2Q96NC0 199 aaKnown RBP14.8□□□□□ -0.04
CIITA-210ENST00000575513 PAAF1Q9BRP4 392 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 RPF1Q9H9Y2 349 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms