RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 SPOCK2Q92563 424 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 NT5C1BQ96P26 610 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 TXLNGYQ9BZA5 131 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 TRIM6Q9C030 488 aaPredicted RBP9.11□□□□□ -0.95
RPAIN-215ENST00000575112 DEFB129Q9H1M3 183 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 MRPL42Q9Y6G3 142 aaKnown RBP9.11□□□□□ -0.95
RPAIN-215ENST00000575112 ASTN1O14525 1302 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 TCP11X1B4DZS4 312 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 DDX3YO15523 660 aaKnown RBP9.11□□□□□ -0.95
RPAIN-215ENST00000575112 THEMIS2Q5TEJ8 643 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 TRIM68Q6AZZ1 485 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 ZNF365Q70YC5 407 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 FRMD5Q7Z6J6 570 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 FITM2Q8N6M3 262 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 TMEM237Q96Q45 408 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 YIPF3Q9GZM5 350 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 INTS9Q9NV88 658 aaKnown RBP9.11□□□□□ -0.95
RPAIN-215ENST00000575112 RNF14Q9UBS8 474 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 P4HBP07237 508 aaKnown RBP9.11□□□□□ -0.95
RPAIN-215ENST00000575112 CYP3A4P08684 503 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 PAEPP09466 180 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 GAP43P17677 238 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 LMNB1P20700 586 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 PMS2P54278 862 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 SGO2Q562F6 1265 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 C10orf76Q5T2E6 689 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 SCYL2Q6P3W7 929 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 PIGWQ7Z7B1 504 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 TRIM50Q86XT4 487 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 MICAL1Q8TDZ2 1067 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 AGPAT1Q99943 283 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 TARS2Q9BW92 718 aaKnown RBP9.11□□□□□ -0.95
RPAIN-215ENST00000575112 ECT2Q9H8V3 914 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 ATP6V0A4Q9HBG4 840 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 GRHL1Q9NZI5 618 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 PCSK1NQ9UHG2 260 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 CNOT7Q9UIV1 285 aaKnown RBP9.11□□□□□ -0.95
RPAIN-215ENST00000575112 MTUS1Q9ULD2 1270 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 ZNF148Q9UQR1 794 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 TRPC6Q9Y210 931 aa9.11□□□□□ -0.95
RPAIN-215ENST00000575112 CAP2P40123 477 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 CNTN2Q02246 1040 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 FAM47EQ6ZV65 393 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 SESTD1Q86VW0 696 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 CYP4X1Q8N118 509 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 CNKSR2Q8WXI2 1034 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 HES6Q96HZ4 224 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 C9orf72Q96LT7 481 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 MXRA8Q9BRK3 442 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 IMPG2Q9BZV3 1241 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 ZWILCHQ9H900 591 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 ALG13Q9NP73 1137 aaKnown RBP9.1□□□□□ -0.95
RPAIN-215ENST00000575112 C1orf112Q9NSG2 853 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 APEX2Q9UBZ4 518 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 SERPINA10Q9UK55 444 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 ROBO1Q9Y6N7 1651 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 A6NNZ2 444 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 K7ERI5 159 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 DNAJC8O75937 253 aaPredicted RBP9.1□□□□□ -0.95
RPAIN-215ENST00000575112 NR3C2P08235 984 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 WEE2P0C1S8 567 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 POTEJP0CG39 1038 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 CNGA1P29973 690 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 GCKP35557 465 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 MMP13P45452 471 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 GMPSP49915 693 aaPredicted RBP9.1□□□□□ -0.95
RPAIN-215ENST00000575112 TRPC3Q13507 836 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 SNRNP35Q16560 246 aaKnown RBP9.1□□□□□ -0.95
RPAIN-215ENST00000575112 CDO1Q16878 200 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 TUBB8Q3ZCM7 444 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 DUPD1Q68J44 220 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 EXOC3L1Q86VI1 746 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 JAMLQ86YT9 394 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 SYCE1Q8N0S2 351 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 FAM151AQ8WW52 585 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 KDM4CQ9H3R0 1056 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 RASAL2Q9UJF2 1139 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 AGTPBP1Q9UPW5 1226 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 C15orf41Q9Y2V0 281 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.1□□□□□ -0.95
RPAIN-215ENST00000575112 LAMB1P07942 1786 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 KIAA0391O15091 583 aaKnown RBP9.1□□□□□ -0.95
RPAIN-215ENST00000575112 KIF1CO43896 1103 aaKnown RBP9.1□□□□□ -0.95
RPAIN-215ENST00000575112 PPFIA2O75334 1257 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 PGK2P07205 417 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 GJB1P08034 283 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 CETPP11597 493 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 NSFP46459 744 aaKnown RBP9.1□□□□□ -0.95
RPAIN-215ENST00000575112 PPP2R5DQ14738 602 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 EPHA7Q15375 998 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 SLC15A2Q16348 729 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 TKFCQ3LXA3 575 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 AGBL2Q5U5Z8 902 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 CGB2Q6NT52 195 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 MOB2Q70IA6 237 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 L3MBTL3Q96JM7 780 aaPredicted RBP9.1□□□□□ -0.95
RPAIN-215ENST00000575112 ERP44Q9BS26 406 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 TAOK3Q9H2K8 898 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 VPS37BQ9H9H4 285 aa9.1□□□□□ -0.95
RPAIN-215ENST00000575112 PIDD1Q9HB75 910 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms