RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 GLRA4Q5JXX5 417 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 FAM173BQ6P4H8 233 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 USP49Q70CQ1 688 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 HASPINQ8TF76 798 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 ZNF707Q96C28 371 aaPredicted RBP19.13■□□□□ 0.65
SMG6-214ENST00000573827 ZBTB45Q96K62 511 aaPredicted RBP19.13■□□□□ 0.65
SMG6-214ENST00000573827 RIPOR3Q96MK2 946 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 ZMAT2Q96NC0 199 aaKnown RBP19.13■□□□□ 0.65
SMG6-214ENST00000573827 FIZ1Q96SL8 496 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 HAPLN2Q9GZV7 340 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 MAN1C1Q9NR34 630 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 MTMR6Q9Y217 621 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 ARIH1Q9Y4X5 557 aaPredicted RBP19.13■□□□□ 0.65
SMG6-214ENST00000573827 MYH11P35749 1972 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 SF3B1O75533 1304 aaKnown RBP eCLIP19.12■□□□□ 0.65
SMG6-214ENST00000573827 SMIM28A0A1B0GU29 152 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 TADA2AO75478 443 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 MCF2P10911 925 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 PLCG1P19174 1290 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 PDCP20941 246 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 SP100P23497 879 aaPredicted RBP19.12■□□□□ 0.65
SMG6-214ENST00000573827 NCKAP1LP55160 1127 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 KARSQ15046 597 aaKnown RBP19.12■□□□□ 0.65
SMG6-214ENST00000573827 PTPN21Q16825 1174 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 ZNF568Q3ZCX4 644 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 ATAT1Q5SQI0 421 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 C15orf39Q6ZRI6 1047 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 TRIM67Q6ZTA4 783 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 TMEM87AQ8NBN3 555 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 C3orf58Q8NDZ4 430 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 LNX1Q8TBB1 728 aaPredicted RBP19.12■□□□□ 0.65
SMG6-214ENST00000573827 RIN2Q8WYP3 895 aaPredicted RBP19.12■□□□□ 0.65
SMG6-214ENST00000573827 PIK3R5Q8WYR1 880 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 ASIC4Q96FT7 647 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 SNX27Q96L92 541 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 REEP2Q9BRK0 252 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.12■□□□□ 0.65
SMG6-214ENST00000573827 FBXO2Q9UK22 296 aaPredicted RBP19.12■□□□□ 0.65
SMG6-214ENST00000573827 USTQ9Y2C2 406 aa19.12■□□□□ 0.65
SMG6-214ENST00000573827 TGM5O43548 720 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 GLUD1P00367 558 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 KCNE1P15382 129 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 RPL17P18621 184 aaKnown RBP19.11■□□□□ 0.65
SMG6-214ENST00000573827 UBA7P41226 1012 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 UPP1Q16831 310 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 PRSS55Q6UWB4 352 aaPredicted RBP19.11■□□□□ 0.65
SMG6-214ENST00000573827 MPZL3Q6UWV2 235 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 BMP8AQ7Z5Y6 402 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 RAD54LQ92698 747 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 CLSTN3Q9BQT9 956 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 CCSER1Q9C0I3 900 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 GOLGA2P5Q9HBQ8 144 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 MORC2Q9Y6X9 1032 aaPredicted RBP19.11■□□□□ 0.65
SMG6-214ENST00000573827 DOCK8Q8NF50 2099 aa19.11■□□□□ 0.65
SMG6-214ENST00000573827 MTCL1Q9Y4B5 1905 aaKnown RBP19.11■□□□□ 0.65
SMG6-214ENST00000573827 DOCK6Q96HP0 2047 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 ADAM12O43184 909 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 TOM1L1O75674 476 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 RFPL2O75678 378 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 FGFR3P22607 806 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 CLCNKBP51801 687 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 MCM6Q14566 821 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 FAM171A1Q5VUB5 890 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 ZPBP2Q6X784 338 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 ZBTB33Q86T24 672 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 GPBP1Q86WP2 473 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 ZDHHC14Q8IZN3 488 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 HDAC7Q8WUI4 952 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 EPSTI1Q96J88 318 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 CDK5RAP3Q96JB5 506 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 TTPALQ9BTX7 342 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 CNTN3Q9P232 1028 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 ODF2LQ9ULJ1 636 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 NR2E1Q9Y466 385 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 DMDP11532 3685 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 WDR87Q6ZQQ6 2873 aa19.1■□□□□ 0.65
SMG6-214ENST00000573827 CITO14578 2027 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 TMEM221A6NGB7 291 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 K7ELQ4 463 aaPredicted RBP19.09■□□□□ 0.65
SMG6-214ENST00000573827 M0R296 226 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 FAM189A1O60320 539 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 N4BP1O75113 896 aaKnown RBP19.09■□□□□ 0.65
SMG6-214ENST00000573827 SPATA31D3P0C874 917 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 OSTNP61366 133 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 MCL1Q07820 350 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 SLC10A6Q3KNW5 377 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 DCLRE1AQ6PJP8 1040 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 SPATA31D4Q6ZUB0 917 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 APBB1IPQ7Z5R6 666 aaPredicted RBP19.09■□□□□ 0.65
SMG6-214ENST00000573827 PALB2Q86YC2 1186 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 CALML4Q96GE6 196 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 CCDC94Q9BW85 323 aaPredicted RBP19.09■□□□□ 0.65
SMG6-214ENST00000573827 TSHZ2Q9NRE2 1034 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 KCNG1Q9UIX4 513 aa19.09■□□□□ 0.65
SMG6-214ENST00000573827 SRPRBQ9Y5M8 271 aaKnown RBP19.09■□□□□ 0.65
SMG6-214ENST00000573827 PIGRP01833 764 aa19.08■□□□□ 0.64
SMG6-214ENST00000573827 MARCKSP29966 332 aaPredicted RBP19.08■□□□□ 0.64
SMG6-214ENST00000573827 SMTNP53814 917 aa19.08■□□□□ 0.64
SMG6-214ENST00000573827 SPECC1Q5M775 1068 aa19.08■□□□□ 0.64
SMG6-214ENST00000573827 RSPO2Q6UXX9 243 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms