RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 HOOK3Q86VS8 718 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 NSUN7Q8NE18 718 aaKnown RBP6.95□□□□□ -1.3
PRPF8-209ENST00000573725 CAGE1Q8TC20 777 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 ARNTL2Q8WYA1 636 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 RSPH1Q8WYR4 309 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 WNT8BQ93098 351 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 TRIM11Q96F44 468 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 C8orf76Q96K31 380 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 GDAP1L1Q96MZ0 367 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 ZSCAN10Q96SZ4 725 aaPredicted RBP6.95□□□□□ -1.3
PRPF8-209ENST00000573725 RMDN3Q96TC7 470 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 NAA15Q9BXJ9 866 aaKnown RBP6.95□□□□□ -1.3
PRPF8-209ENST00000573725 RETREG1Q9H6L5 497 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 ZSWIM6Q9HCJ5 1215 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 PANK4Q9NVE7 773 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 RHBDL2Q9NX52 303 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 TUBA8Q9NY65 449 aaPredicted RBP6.95□□□□□ -1.3
PRPF8-209ENST00000573725 ZSWIM5Q9P217 1185 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 GTF2IRD1Q9UHL9 959 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 CROTQ9UKG9 612 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 NOD1Q9Y239 953 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 ITM2BQ9Y287 266 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 SH3GLB1Q9Y371 365 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 LRRC42Q9Y546 428 aa6.95□□□□□ -1.3
PRPF8-209ENST00000573725 FNDC1Q4ZHG4 1894 aaPredicted RBP6.95□□□□□ -1.3
PRPF8-209ENST00000573725 PLXNA4Q9HCM2 1894 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 SOWAHDA6NJG2 315 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 GOLGA8AA7E2F4 631 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 KIF28PB7ZC32 967 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 HAS3O00219 553 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 GTPBP6O43824 516 aaPredicted RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ATP9BO43861 1147 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 TLL1O43897 1013 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 PPP1R11O60927 126 aaPredicted RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ATP2C2O75185 946 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 RGS20O76081 388 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 UPP2O95045 317 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 CXCL10P02778 98 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 NR3C2P08235 984 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 MMEP08473 750 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 GSTA2P09210 222 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ZNF286BP0CG31 522 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 CKBP12277 381 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 HOXD8P13378 290 aaPredicted RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ATP6V1C1P21283 382 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 FUT4P22083 530 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 FECHP22830 423 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 TNFRSF8P28908 595 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 HOXD12P35452 270 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 CD97P48960 835 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 PSEN2P49810 448 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 HSD17B4P51659 736 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 USP11P51784 963 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ZNF200P98182 395 aaPredicted RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 MYL5Q02045 173 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 NSUN2Q08J23 767 aaKnown RBP eCLIP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 FOXD4Q12950 439 aaPredicted RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 MBTPS1Q14703 1052 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 DGKDQ16760 1214 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 SLC35G1Q2M3R5 365 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 TRIM71Q2Q1W2 868 aaKnown RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ARHGEF16Q5VV41 709 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 FOXB2Q5VYV0 432 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 CREB3L3Q68CJ9 461 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 TMEM154Q6P9G4 183 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 TRAF7Q6Q0C0 670 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 PACS1Q6VY07 963 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 LRRC8DQ7L1W4 858 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ZNF554Q86TJ5 538 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 FBXO11Q86XK2 927 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 MCF2L2Q86YR7 1114 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ARFGAP2Q8N6H7 521 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 PDILTQ8N807 584 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 PPTC7Q8NI37 304 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 GDPD5Q8WTR4 605 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 CTNNBL1Q8WYA6 563 aaPredicted RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 MRPS27Q92552 414 aaKnown RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 EMID1Q96A84 441 aaPredicted RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 MTMR8Q96EF0 704 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 DDX27Q96GQ7 796 aaKnown RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ZIM3Q96PE6 472 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ALG1Q9BT22 464 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 DSCC1Q9BVC3 393 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 FAM192AQ9GZU8 254 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 VCXQ9H320 206 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 VAT1LQ9HCJ6 419 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 PXMP2Q9NR77 195 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 INIPQ9NRY2 104 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 RABL2BQ9UNT1 228 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 CEP131Q9UPN4 1083 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ZNF148Q9UQR1 794 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 MRPL11Q9Y3B7 192 aaKnown RBP6.94□□□□□ -1.3
PRPF8-209ENST00000573725 DAAM1Q9Y4D1 1078 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 CYP46A1Q9Y6A2 500 aa6.94□□□□□ -1.3
PRPF8-209ENST00000573725 ZDBF2Q9HCK1 2354 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 A0A1W2PQ27 194 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 A0A1W2PQ64 194 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 A0A1W2PQD8 194 aa6.93□□□□□ -1.3
PRPF8-209ENST00000573725 HMGB1P1B2RPK0 211 aaPredicted RBP6.93□□□□□ -1.3
PRPF8-209ENST00000573725 TRAPPC3O43617 180 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms