RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PHLDB3Q6NSJ2 640 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 GLB1LQ6UWU2 654 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 MRPL10Q7Z7H8 261 aaKnown RBP8.24□□□□□ -1.09
NUP88-205ENST00000572809 RBM23Q86U06 439 aaKnown RBP8.24□□□□□ -1.09
NUP88-205ENST00000572809 CCDC116Q8IYX3 515 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 CNNM3Q8NE01 707 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 ASAP3Q8TDY4 903 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 RSPH1Q8WYR4 309 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 MRPS27Q92552 414 aaKnown RBP8.24□□□□□ -1.09
NUP88-205ENST00000572809 LPPQ93052 612 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 NECAB3Q96P71 396 aaPredicted RBP8.24□□□□□ -1.09
NUP88-205ENST00000572809 MRPL9Q9BYD2 267 aaKnown RBP8.24□□□□□ -1.09
NUP88-205ENST00000572809 RAB34Q9BZG1 259 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 TLR9Q9NR96 1032 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 SPG21Q9NZD8 308 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 LZTS1Q9Y250 596 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 PRUNE2Q8WUY3 3088 aa8.24□□□□□ -1.09
NUP88-205ENST00000572809 TCF20Q9UGU0 1960 aaKnown RBP8.24□□□□□ -1.09
NUP88-205ENST00000572809 ARHGEF35A5YM69 484 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 MEIS3P2A8K0S8 358 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 SFI1A8K8P3 1242 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 NT5C1B-RDH14C9J2C7 533 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 LINC01565O15544 149 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 DKK1O94907 266 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 CYP11B2P19099 503 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 GTF2F1P35269 517 aaKnown RBP eCLIP8.23□□□□□ -1.09
NUP88-205ENST00000572809 PPM1AP35813 382 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 PBX3P40426 434 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 NRIP1P48552 1158 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 BCAR1P56945 870 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 RNASELQ05823 741 aaKnown RBP8.23□□□□□ -1.09
NUP88-205ENST00000572809 CBLBQ13191 982 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 CAPSQ13938 189 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 ECM1Q16610 540 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 NOMO2Q5JPE7 1267 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 UBXN11Q5T124 520 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 HAUS3Q68CZ6 603 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 DTHD1Q6ZMT9 781 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 AGMOQ6ZNB7 445 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 SND1Q7KZF4 910 aaKnown RBP eCLIP8.23□□□□□ -1.09
NUP88-205ENST00000572809 ADGRD2Q7Z7M1 963 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 EFHBQ8N7U6 833 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 IGSF22Q8N9C0 903 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 MCPH1Q8NEM0 835 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 C1orf216Q8TAB5 229 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 CPB2Q96IY4 423 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 NFKBIZQ9BYH8 718 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 BACH2Q9BYV9 841 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 POLR3FQ9H1D9 316 aaPredicted RBP8.23□□□□□ -1.09
NUP88-205ENST00000572809 TLE6Q9H808 572 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 UBN1Q9NPG3 1134 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 GPRC5CQ9NQ84 441 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 KIAA1024Q9UPX6 916 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 FAM50BQ9Y247 325 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 INPP5FQ9Y2H2 1132 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 CUL9Q8IWT3 2517 aa8.23□□□□□ -1.09
NUP88-205ENST00000572809 LRRIQ4A6NIV6 560 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 FSCN2O14926 492 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 PER2O15055 1255 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 TSPAN1O60635 241 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 ALDH2P05091 517 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 ITGA4P13612 1032 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 IL9P15248 144 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 NCLP19338 710 aaKnown RBP8.22□□□□□ -1.09
NUP88-205ENST00000572809 PRPHP41219 470 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 NDUFV1P49821 464 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 MBTD1Q05BQ5 628 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 DLX2Q07687 328 aaPredicted RBP8.22□□□□□ -1.09
NUP88-205ENST00000572809 BMS1Q14692 1282 aaKnown RBP8.22□□□□□ -1.09
NUP88-205ENST00000572809 IL17AQ16552 155 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 KRT79Q5XKE5 535 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 NOTUMQ6P988 496 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 LYPD4Q6UWN0 246 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 TMC7Q7Z402 723 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 FAM178BQ8IXR5 827 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 SLC39A11Q8N1S5 342 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 SMG8Q8ND04 991 aaKnown RBP8.22□□□□□ -1.09
NUP88-205ENST00000572809 URGCPQ8TCY9 931 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 SNX29Q8TEQ0 813 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 CCDC51Q96ER9 411 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 TMEM169Q96HH4 297 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 TCF25Q9BQ70 676 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 EIF2AQ9BY44 585 aaKnown RBP8.22□□□□□ -1.09
NUP88-205ENST00000572809 CSRNP2Q9H175 543 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 BHMT2Q9H2M3 363 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 NRDE2Q9H7Z3 1164 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 RSAD1Q9HA92 442 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 POLD4Q9HCU8 107 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 NGRNQ9NPE2 291 aaKnown RBP8.22□□□□□ -1.09
NUP88-205ENST00000572809 ENTPD7Q9NQZ7 604 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 TBC1D13Q9NVG8 400 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 KANSL3Q9P2N6 904 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 DNM3Q9UQ16 869 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 IPPQ9Y573 584 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 PCDHGC5Q9Y5F6 944 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 CNTNAP2Q9UHC6 1331 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 MYO7AQ13402 2215 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 KIAA1671Q9BY89 1806 aa8.22□□□□□ -1.09
NUP88-205ENST00000572809 A0A1B0GUA9 196 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 FSD2A1L4K1 749 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms