RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 MTMR3Q13615 1198 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 DHX8Q14562 1220 aaKnown RBP14.97□□□□□ -0.01
PRPF8-202ENST00000571346 PSMD5Q16401 504 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 SYT2Q8N9I0 419 aaPredicted RBP14.97□□□□□ -0.01
PRPF8-202ENST00000571346 KREMEN2Q8NCW0 462 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 PBXIP1Q96AQ6 731 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 BICD1Q96G01 975 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 AK8Q96MA6 479 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 MFSD14AQ96MC6 490 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 TTPALQ9BTX7 342 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 TMEM134Q9H6X4 195 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 C17orf75Q9HAS0 396 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 GOLGA2P5Q9HBQ8 144 aa14.97□□□□□ -0.01
PRPF8-202ENST00000571346 RBM19Q9Y4C8 960 aaKnown RBP14.97□□□□□ -0.01
PRPF8-202ENST00000571346 TGM5O43548 720 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 KRT18P05783 430 aaKnown RBP14.96□□□□□ -0.01
PRPF8-202ENST00000571346 PDCP20941 246 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 GRM5P41594 1212 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 MATR3P43243 847 aaKnown RBP eCLIP14.96□□□□□ -0.01
PRPF8-202ENST00000571346 CLCNKBP51801 687 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 CUL4AQ13619 759 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 NOLC1Q14978 699 aaKnown RBP eCLIP14.96□□□□□ -0.01
PRPF8-202ENST00000571346 KARSQ15046 597 aaKnown RBP14.96□□□□□ -0.01
PRPF8-202ENST00000571346 SF3A1Q15459 793 aaKnown RBP14.96□□□□□ -0.01
PRPF8-202ENST00000571346 NAB2Q15742 525 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 MPZL3Q6UWV2 235 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 C15orf39Q6ZRI6 1047 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 GPBP1Q86WP2 473 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 SUGP1Q8IWZ8 645 aaKnown RBP14.96□□□□□ -0.01
PRPF8-202ENST00000571346 ACSF2Q96CM8 615 aaPredicted RBP14.96□□□□□ -0.01
PRPF8-202ENST00000571346 PPP1R10Q96QC0 940 aaKnown RBP14.96□□□□□ -0.01
PRPF8-202ENST00000571346 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 KCND2Q9NZV8 630 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 TRIP11Q15643 1979 aa14.96□□□□□ -0.01
PRPF8-202ENST00000571346 VWA8A3KMH1 1905 aa14.96□□□□□ -0.02
PRPF8-202ENST00000571346 CCDC195A0A1B0GUA6 201 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 B3GAT3O94766 335 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 MAPTP10636 758 aaKnown RBP14.95□□□□□ -0.02
PRPF8-202ENST00000571346 MCF2P10911 925 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 PLCG1P19174 1290 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 GRIN1Q05586 938 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 ELAVL2Q12926 359 aaKnown RBP14.95□□□□□ -0.02
PRPF8-202ENST00000571346 LIN9Q5TKA1 542 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 OTOP3Q7RTS5 596 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 TMEM161BQ8NDZ6 487 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 CMASQ8NFW8 434 aaPredicted RBP14.95□□□□□ -0.02
PRPF8-202ENST00000571346 SPIRE2Q8WWL2 714 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 SMG7Q92540 1137 aaKnown RBP14.95□□□□□ -0.02
PRPF8-202ENST00000571346 SNX27Q96L92 541 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 REEP2Q9BRK0 252 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 SMOC2Q9H3U7 446 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 ZHX3Q9H4I2 956 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 PIDD1Q9HB75 910 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 FNIP2Q9P278 1114 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 SORCS3Q9UPU3 1222 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 USTQ9Y2C2 406 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 CITO14578 2027 aa14.95□□□□□ -0.02
PRPF8-202ENST00000571346 CLUHO75153 1309 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 ZNF318Q5VUA4 2279 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 SMIM28A0A1B0GU29 152 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 I3L4J1 428 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 K7ENM7 598 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 TBCAO75347 108 aaKnown RBP14.94□□□□□ -0.02
PRPF8-202ENST00000571346 FAM13AO94988 1023 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 BRD1O95696 1058 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 PROZP22891 400 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 GBP2P32456 591 aaPredicted RBP14.94□□□□□ -0.02
PRPF8-202ENST00000571346 LONP1P36776 959 aaKnown RBP14.94□□□□□ -0.02
PRPF8-202ENST00000571346 SEZ6Q53EL9 994 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.94□□□□□ -0.02
PRPF8-202ENST00000571346 ZDHHC14Q8IZN3 488 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 PLCD3Q8N3E9 789 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 KCTD17Q8N5Z5 321 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 PIK3R5Q8WYR1 880 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 STAMQ92783 540 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 UROC1Q96N76 676 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 ACAP3Q96P50 834 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 PTPRHQ9HD43 1115 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 SLC38A7Q9NVC3 462 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 LARSQ9P2J5 1176 aaKnown RBP14.94□□□□□ -0.02
PRPF8-202ENST00000571346 LIMD1Q9UGP4 676 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 ARIH1Q9Y4X5 557 aaPredicted RBP14.94□□□□□ -0.02
PRPF8-202ENST00000571346 KMT2EQ8IZD2 1858 aa14.94□□□□□ -0.02
PRPF8-202ENST00000571346 PDCD11Q14690 1871 aaKnown RBP14.93□□□□□ -0.02
PRPF8-202ENST00000571346 H0YCG3 227 aa14.93□□□□□ -0.02
PRPF8-202ENST00000571346 HNRNPDLO14979 420 aaKnown RBP14.93□□□□□ -0.02
PRPF8-202ENST00000571346 SLC26A4O43511 780 aa14.93□□□□□ -0.02
PRPF8-202ENST00000571346 TOM1L1O75674 476 aa14.93□□□□□ -0.02
PRPF8-202ENST00000571346 CEBPZQ03701 1054 aaKnown RBP14.93□□□□□ -0.02
PRPF8-202ENST00000571346 SOX4Q06945 474 aaPredicted RBP14.93□□□□□ -0.02
PRPF8-202ENST00000571346 MCM6Q14566 821 aa14.93□□□□□ -0.02
PRPF8-202ENST00000571346 UPP1Q16831 310 aa14.93□□□□□ -0.02
PRPF8-202ENST00000571346 PDXDC1Q6P996 788 aa14.93□□□□□ -0.02
PRPF8-202ENST00000571346 GET4Q7L5D6 327 aaPredicted RBP14.93□□□□□ -0.02
PRPF8-202ENST00000571346 GPR65Q8IYL9 337 aa14.93□□□□□ -0.02
PRPF8-202ENST00000571346 UBALD2Q8IYN6 164 aa14.93□□□□□ -0.02
PRPF8-202ENST00000571346 C3orf58Q8NDZ4 430 aa14.93□□□□□ -0.02
PRPF8-202ENST00000571346 LNX1Q8TBB1 728 aaPredicted RBP14.93□□□□□ -0.02
PRPF8-202ENST00000571346 LRRC15Q8TF66 581 aa14.93□□□□□ -0.02
PRPF8-202ENST00000571346 RAD54LQ92698 747 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms