RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CA14Q9ULX7 337 aa19.35■□□□□ 0.69
CIITA-206ENST00000571190 ZFHX2Q9C0A1 2572 aaPredicted RBP19.34■□□□□ 0.69
CIITA-206ENST00000571190 FGFR3P22607 806 aa19.34■□□□□ 0.69
CIITA-206ENST00000571190 CCT6AP40227 531 aaKnown RBP19.34■□□□□ 0.69
CIITA-206ENST00000571190 RBM25P49756 843 aaKnown RBP19.34■□□□□ 0.69
CIITA-206ENST00000571190 TOB1P50616 345 aaPredicted RBP19.34■□□□□ 0.69
CIITA-206ENST00000571190 PPP2R5AQ15172 486 aa19.34■□□□□ 0.69
CIITA-206ENST00000571190 ANGPT1Q15389 498 aa19.34■□□□□ 0.69
CIITA-206ENST00000571190 GLRA4Q5JXX5 417 aa19.34■□□□□ 0.69
CIITA-206ENST00000571190 RSPO2Q6UXX9 243 aaPredicted RBP19.34■□□□□ 0.69
CIITA-206ENST00000571190 GPR152Q8TDT2 470 aa19.34■□□□□ 0.69
CIITA-206ENST00000571190 KIF2CQ99661 725 aa19.34■□□□□ 0.69
CIITA-206ENST00000571190 ADPGKQ9BRR6 497 aa19.34■□□□□ 0.69
CIITA-206ENST00000571190 NUMBLQ9Y6R0 609 aa19.34■□□□□ 0.69
CIITA-206ENST00000571190 TMEM189-UBE2V1I3L0A0 370 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 C8AP07357 584 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 HNRNPA1P09651 372 aaKnown RBP eCLIP19.33■□□□□ 0.68
CIITA-206ENST00000571190 FSHRP23945 695 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 TRAPPC10P48553 1259 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 EFNA5P52803 228 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 RAB33AQ14088 237 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 ATF7IP2Q5U623 682 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 HAUS3Q68CZ6 603 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 DAW1Q8N136 415 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 CEP120Q8N960 986 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 IGSF22Q8N9C0 903 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 C3orf58Q8NDZ4 430 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 KIFAP3Q92845 792 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 FGF14Q92915 247 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 LRWD1Q9UFC0 647 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 KIAA1024Q9UPX6 916 aa19.33■□□□□ 0.68
CIITA-206ENST00000571190 MYO10Q9HD67 2058 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 CCL16O15467 120 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 HOXA9P31269 272 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 CLCNKBP51801 687 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 ELAVL2Q12926 359 aaKnown RBP19.32■□□□□ 0.68
CIITA-206ENST00000571190 IL17AQ16552 155 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 DCAF4L1Q3SXM0 396 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 PARM1Q6UWI2 310 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.32■□□□□ 0.68
CIITA-206ENST00000571190 TAS1R3Q7RTX0 852 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 IFT74Q96LB3 600 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 TBC1D17Q9HA65 648 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 GOLGA2P5Q9HBQ8 144 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 PTPRHQ9HD43 1115 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 SLC2A4RGQ9NR83 387 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 DDX19AQ9NUU7 478 aaKnown RBP19.32■□□□□ 0.68
CIITA-206ENST00000571190 DLGAP2Q9P1A6 1054 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 MTRRQ9UBK8 725 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 CDH7Q9ULB5 785 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 TNFSF13BQ9Y275 285 aa19.32■□□□□ 0.68
CIITA-206ENST00000571190 PLXNA3P51805 1871 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 PP2D1A8MPX8 630 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 B3GAT3O94766 335 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 U2AF2P26368 475 aaKnown RBP eCLIP19.31■□□□□ 0.68
CIITA-206ENST00000571190 OR1D2P34982 312 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 NPTX2P47972 431 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 HMGN5P82970 282 aaKnown RBP19.31■□□□□ 0.68
CIITA-206ENST00000571190 SOX4Q06945 474 aaPredicted RBP19.31■□□□□ 0.68
CIITA-206ENST00000571190 PDIA5Q14554 519 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 UPP1Q16831 310 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 XKR4Q5GH76 650 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 PPM1LQ5SGD2 360 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 ERICH6BQ5W0A0 696 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 DCLRE1AQ6PJP8 1040 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 ALKAL1Q6UXT8 129 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 ITFG1Q8TB96 612 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 NKD2Q969F2 451 aaPredicted RBP19.31■□□□□ 0.68
CIITA-206ENST00000571190 CDT1Q9H211 546 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 PCDHB6Q9Y5E3 794 aa19.31■□□□□ 0.68
CIITA-206ENST00000571190 ZFP37Q9Y6Q3 630 aaPredicted RBP19.31■□□□□ 0.68
CIITA-206ENST00000571190 C2orf16Q68DN1 1984 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 MYO15AQ9UKN7 3530 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 SMIM28A0A1B0GU29 152 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 E9PMD0 336 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 I3L4J1 428 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 K7ERI5 159 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 STK25O00506 426 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 EIF5BO60841 1220 aaKnown RBP19.3■□□□□ 0.68
CIITA-206ENST00000571190 POU2F2P09086 479 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 TKTP29401 623 aaKnown RBP19.3■□□□□ 0.68
CIITA-206ENST00000571190 BRCC3P46736 316 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 GPC5P78333 572 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 MAPK7Q13164 816 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 PTGDRQ13258 359 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 AXDND1Q5T1B0 1012 aaPredicted RBP19.3■□□□□ 0.68
CIITA-206ENST00000571190 LIN9Q5TKA1 542 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 PHLDB3Q6NSJ2 640 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 PDXDC1Q6P996 788 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 SLC7A14Q8TBB6 771 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 SNX29Q8TEQ0 813 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 FGF13Q92913 245 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 ZSCAN31Q96LW9 406 aaPredicted RBP19.3■□□□□ 0.68
CIITA-206ENST00000571190 ACO2Q99798 780 aaKnown RBP19.3■□□□□ 0.68
CIITA-206ENST00000571190 ARHGEF3Q9NR81 526 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 HCFC1R1Q9NWW0 138 aa19.3■□□□□ 0.68
CIITA-206ENST00000571190 DNMT3BQ9UBC3 853 aaKnown RBP19.3■□□□□ 0.68
CIITA-206ENST00000571190 ABLIM1O14639 778 aa19.29■□□□□ 0.68
CIITA-206ENST00000571190 MEFVO15553 781 aaPredicted RBP19.29■□□□□ 0.68
CIITA-206ENST00000571190 DCNP07585 359 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms