RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GUCY2CP25092 1073 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 GBP2P32456 591 aaPredicted RBP14.63□□□□□ -0.07
CCDC40-205ENST00000571028 PHKA2P46019 1235 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 MAPK7Q13164 816 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 E2F4Q16254 413 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 LONRF3Q496Y0 759 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 ELMSAN1Q6PJG2 1045 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 ZNF410Q86VK4 478 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 DAW1Q8N136 415 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 MYCT1Q8N699 235 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 DDX12PQ92771 950 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 KIFAP3Q92845 792 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 DRC1Q96MC2 740 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 INO80BQ9C086 356 aaPredicted RBP14.63□□□□□ -0.07
CCDC40-205ENST00000571028 BLZF1Q9H2G9 400 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 TBC1D17Q9HA65 648 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 DACT1Q9NYF0 836 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 DLL3Q9NYJ7 618 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 IRAK3Q9Y616 596 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 DMXL1Q9Y485 3027 aa14.63□□□□□ -0.07
CCDC40-205ENST00000571028 ARID2Q68CP9 1835 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 WDR87Q6ZQQ6 2873 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 A0A0U1RQF3 1178 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 SLC16A4O15374 487 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 NARSO43776 548 aaKnown RBP14.62□□□□□ -0.07
CCDC40-205ENST00000571028 KLRC2P26717 231 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 CASP1P29466 404 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 CDC42EP1Q00587 391 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 RNASELQ05823 741 aaKnown RBP14.62□□□□□ -0.07
CCDC40-205ENST00000571028 PPP2R5AQ15172 486 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 TMEM132AQ24JP5 1023 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 RSPO4Q2I0M5 234 aaPredicted RBP14.62□□□□□ -0.07
CCDC40-205ENST00000571028 CATSPER4Q7RTX7 472 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 DDX53Q86TM3 631 aaKnown RBP14.62□□□□□ -0.07
CCDC40-205ENST00000571028 ZNF710Q8N1W2 664 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 SLC22A17Q8WUG5 538 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 RSPH1Q8WYR4 309 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 MINDY3Q9H8M7 445 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 IFT122Q9HBG6 1241 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 KCND2Q9NZV8 630 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 TBC1D7Q9P0N9 293 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 HPSEQ9Y251 543 aa14.62□□□□□ -0.07
CCDC40-205ENST00000571028 KINO60870 393 aaKnown RBP14.61□□□□□ -0.07
CCDC40-205ENST00000571028 ERLIN2O94905 339 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 ZNF202O95125 648 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 DCNP07585 359 aaKnown RBP14.61□□□□□ -0.07
CCDC40-205ENST00000571028 NAMPTP43490 491 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 ASIC1P78348 528 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 DMP1Q13316 513 aaPredicted RBP14.61□□□□□ -0.07
CCDC40-205ENST00000571028 GLB1LQ6UWU2 654 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 C15orf39Q6ZRI6 1047 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 SRGAP1Q7Z6B7 1085 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 ZBTB8OSQ8IWT0 167 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 CNNM3Q8NE01 707 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 IGSF21Q96ID5 467 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 GBP4Q96PP9 640 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 PYM1Q9BRP8 204 aaKnown RBP14.61□□□□□ -0.07
CCDC40-205ENST00000571028 TIPINQ9BVW5 301 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 CUEDC2Q9H467 287 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 KMT5AQ9NQR1 393 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 NCDNQ9UBB6 729 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 STK39Q9UEW8 545 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 USP20Q9Y2K6 914 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 SIT1Q9Y3P8 196 aa14.61□□□□□ -0.07
CCDC40-205ENST00000571028 EP300Q09472 2414 aaPredicted RBP14.61□□□□□ -0.07
CCDC40-205ENST00000571028 KRBA1A5PL33 1030 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 ACTN4O43707 911 aaKnown RBP14.6□□□□□ -0.07
CCDC40-205ENST00000571028 SLFN14P0C7P3 912 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 SP9P0CG40 484 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 PLS3P13797 630 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 SFPQP23246 707 aaKnown RBP eCLIP14.6□□□□□ -0.07
CCDC40-205ENST00000571028 NPTX2P47972 431 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 PTENP60484 403 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 AMPD3Q01432 767 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 TMEM173Q86WV6 379 aaPredicted RBP14.6□□□□□ -0.07
CCDC40-205ENST00000571028 C1orf210Q8IVY1 113 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 DCLK2Q8N568 766 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 SECISBP2LQ93073 1101 aaKnown RBP14.6□□□□□ -0.07
CCDC40-205ENST00000571028 PAGE5Q96GU1 130 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 LRRC27Q9C0I9 530 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 GBP3Q9H0R5 595 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 TNMDQ9H2S6 317 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 PANK4Q9NVE7 773 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 KBTBD4Q9NVX7 518 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 ODF2LQ9ULJ1 636 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 PIN4Q9Y237 131 aaKnown RBP14.6□□□□□ -0.07
CCDC40-205ENST00000571028 INPP5FQ9Y2H2 1132 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 DNAH14Q0VDD8 3507 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 NCOR2Q9Y618 2525 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 LOXHD1Q8IVV2 1947 aa14.6□□□□□ -0.07
CCDC40-205ENST00000571028 CACNA1BQ00975 2339 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 B4GALT5O43286 388 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 SRFP11831 508 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 SMTNP53814 917 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 MBTD1Q05BQ5 628 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 PTPN14Q15678 1187 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 KRBA2Q6ZNG9 492 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 CDR2LQ86X02 465 aaPredicted RBP14.59□□□□□ -0.07
CCDC40-205ENST00000571028 SFR1Q86XK3 245 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 RSAD2Q8WXG1 361 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms