RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 GTF2BQ00403 316 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 MCL1Q07820 350 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 E2F4Q16254 413 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 XKR4Q5GH76 650 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 PTCRAQ6ISU1 281 aaPredicted RBP13.87□□□□□ -0.19
TVP23B-204ENST00000571018 ALKAL1Q6UXT8 129 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 TMEM184AQ6ZMB5 413 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 VN1R2Q8NFZ6 395 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 MSLNLQ96KJ4 702 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 ACAP3Q96P50 834 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 CUEDC2Q9H467 287 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 TOPORSQ9NS56 1045 aaPredicted RBP13.87□□□□□ -0.19
TVP23B-204ENST00000571018 CLEC1BQ9P126 229 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 SEL1LQ9UBV2 794 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 MYO7AQ13402 2215 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 MYH11P35749 1972 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 PRUNE2Q8WUY3 3088 aa13.87□□□□□ -0.19
TVP23B-204ENST00000571018 F8W810 466 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 SOD2P04179 222 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 GAP43P17677 238 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 NMT1P30419 496 aaKnown RBP13.86□□□□□ -0.19
TVP23B-204ENST00000571018 LIG4P49917 911 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 OSTNP61366 133 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 RBM10P98175 930 aaKnown RBP13.86□□□□□ -0.19
TVP23B-204ENST00000571018 NOLC1Q14978 699 aaKnown RBP eCLIP13.86□□□□□ -0.19
TVP23B-204ENST00000571018 PTPN14Q15678 1187 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 ZNF720Q7Z2F6 126 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 SFR1Q86XK3 245 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 MAP4K3Q8IVH8 894 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 IQUBQ8NA54 791 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 AUTS2Q8WXX7 1259 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 BICD1Q96G01 975 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 PPP1R10Q96QC0 940 aaKnown RBP13.86□□□□□ -0.19
TVP23B-204ENST00000571018 UHRF1Q96T88 793 aaPredicted RBP13.86□□□□□ -0.19
TVP23B-204ENST00000571018 PAAF1Q9BRP4 392 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 HERC2P3Q9BVR0 1158 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 HAPLN2Q9GZV7 340 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 TNMDQ9H2S6 317 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 KBTBD4Q9NVX7 518 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 ANKFY1Q9P2R3 1169 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 CD207Q9UJ71 328 aa13.86□□□□□ -0.19
TVP23B-204ENST00000571018 TDRD15B5MCY1 1934 aaKnown RBP13.86□□□□□ -0.19
TVP23B-204ENST00000571018 SMIM28A0A1B0GU29 152 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.85□□□□□ -0.19
TVP23B-204ENST00000571018 FRMD3A2A2Y4 597 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 HNRNPDLO14979 420 aaKnown RBP13.85□□□□□ -0.19
TVP23B-204ENST00000571018 LILRB3O75022 631 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 CLASP2O75122 1294 aaKnown RBP13.85□□□□□ -0.19
TVP23B-204ENST00000571018 HARSP12081 509 aaKnown RBP13.85□□□□□ -0.19
TVP23B-204ENST00000571018 IL9P15248 144 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 CA8P35219 290 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 KRT85P78386 507 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 COASYQ13057 564 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 HSP90AA2PQ14568 343 aaPredicted RBP13.85□□□□□ -0.19
TVP23B-204ENST00000571018 ZC2HC1CQ53FD0 456 aaPredicted RBP13.85□□□□□ -0.19
TVP23B-204ENST00000571018 GLRA4Q5JXX5 417 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 RESP18Q5W5W9 173 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 TAS1R1Q7RTX1 841 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 RABGGTAQ92696 567 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 DHX58Q96C10 678 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 HVCN1Q96D96 273 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 SNX27Q96L92 541 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 STRA6Q9BX79 667 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 GPR62Q9BZJ7 368 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 LRRC27Q9C0I9 530 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 OCEL1Q9H607 264 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 OLFML3Q9NRN5 406 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 MRPL17Q9NRX2 175 aaKnown RBP13.85□□□□□ -0.19
TVP23B-204ENST00000571018 CHST7Q9NS84 486 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 FAM13BQ9NYF5 915 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 CACNG4Q9UBN1 327 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 ADAM28Q9UKQ2 775 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 BARX2Q9UMQ3 279 aaPredicted RBP13.85□□□□□ -0.19
TVP23B-204ENST00000571018 FAM50BQ9Y247 325 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 SSX2IPQ9Y2D8 614 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 ATP6V1DQ9Y5K8 247 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 HCFC2Q9Y5Z7 792 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 REV3LO60673 3130 aa13.85□□□□□ -0.19
TVP23B-204ENST00000571018 CASTOR2A6NHX0 329 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 MEFVO15553 781 aaPredicted RBP13.84□□□□□ -0.19
TVP23B-204ENST00000571018 MBTPS2O43462 519 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 TADA2AO75478 443 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 PPP1R37O75864 691 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 URODP06132 367 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 SRGAP2BP0DMP2 458 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 IDEP14735 1019 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 KCNE1P15382 129 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 MATR3P43243 847 aaKnown RBP eCLIP13.84□□□□□ -0.191e-6■■■■□ 24.8
TVP23B-204ENST00000571018 GLUD2P49448 558 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 AMPD3Q01432 767 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 SMAD4Q13485 552 aaKnown RBP13.84□□□□□ -0.19
TVP23B-204ENST00000571018 CLUL1Q15846 466 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 KYAT1Q16773 422 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 SLC10A6Q3KNW5 377 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 SEZ6Q53EL9 994 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 HERC4Q5GLZ8 1057 aaPredicted RBP13.84□□□□□ -0.19
TVP23B-204ENST00000571018 KIAA0319Q5VV43 1072 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 FUT10Q6P4F1 479 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 GPR65Q8IYL9 337 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 SMRP1Q8NCR6 262 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms