RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 RAB20Q9NX57 234 aa11.9□□□□□ -0.5
NPLOC4-203ENST00000570300 PTPN22Q9Y2R2 807 aa11.9□□□□□ -0.5
NPLOC4-203ENST00000570300 ADGRG1Q9Y653 693 aa11.9□□□□□ -0.5
NPLOC4-203ENST00000570300 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
NPLOC4-203ENST00000570300 EPN1Q9Y6I3 576 aaPredicted RBP11.9□□□□□ -0.5
NPLOC4-203ENST00000570300 FRMPD3Q5JV73 1810 aa11.9□□□□□ -0.5
NPLOC4-203ENST00000570300 SOWAHDA6NJG2 315 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 KIF2AO00139 706 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 NDUFA10O95299 355 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 CCDC175P0C221 793 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 CCDC172P0C7W6 258 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 ACTN1P12814 892 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 FERP16591 822 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 CYLC1P35663 651 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 GRM5P41594 1212 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 MATR3P43243 847 aaKnown RBP eCLIP11.89□□□□□ -0.512e-8■■■■■ 31.3
NPLOC4-203ENST00000570300 MRPS6P82932 125 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 ZNF200P98182 395 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 GCNT1Q02742 428 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 PTK7Q13308 1070 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 ENOX2Q16206 610 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 DUOXA2Q1HG44 320 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 SLC9C1Q4G0N8 1177 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 ZBTB41Q5SVQ8 909 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 IQCEQ6IPM2 695 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 PHLDB3Q6NSJ2 640 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 NOTUMQ6P988 496 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 SLC27A1Q6PCB7 646 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 SCLT1Q96NL6 688 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 ADPGKQ9BRR6 497 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 CELF4Q9BZC1 486 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 PLEKHA5Q9HAU0 1116 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 PDE11AQ9HCR9 933 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 NLRC4Q9NPP4 1024 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 PAK6Q9NQU5 681 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 ARHGAP20Q9P2F6 1191 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 PHF24Q9UPV7 400 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 PPP2R2CQ9Y2T4 447 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 TRIM17Q9Y577 477 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 FHOD1Q9Y613 1164 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 SQORQ9Y6N5 450 aa11.89□□□□□ -0.51
NPLOC4-203ENST00000570300 ATP8B3O60423 1300 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 F8VZ95 297 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 RBAK-RBAKDNI3L0D1 243 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 STAG3L1P0CL83 205 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 DLATP10515 647 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 TNNI1P19237 187 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 STAT1P42224 750 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 WNT7BP56706 349 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 KRT83P78385 493 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 MGAT3Q09327 533 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 ITGA7Q13683 1181 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 FAM26DQ5JW98 314 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 TDRD10Q5VZ19 366 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 TOGARAM2Q6ZUX3 1019 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 NYAP1Q6ZVC0 841 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 CATSPER4Q7RTX7 472 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 ZBTB33Q86T24 672 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 REXO1L1PQ8IX06 675 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 TAS1R2Q8TE23 839 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 SEMA4DQ92854 862 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 PPP1R13BQ96KQ4 1090 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 CCDC42Q96M95 316 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 GLT1D1Q96MS3 346 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 SPAG5Q96R06 1193 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 POP1Q99575 1024 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 GPR88Q9GZN0 384 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 SENP6Q9GZR1 1112 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 NHEJ1Q9H9Q4 299 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 RPF1Q9H9Y2 349 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 CDHR5Q9HBB8 845 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 CHST12Q9NRB3 414 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 DNAJC12Q9UKB3 198 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 DERAQ9Y315 318 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 TRPV2Q9Y5S1 764 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 ANK1P16157 1881 aa11.88□□□□□ -0.51
NPLOC4-203ENST00000570300 PTPRJQ12913 1337 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 MROH7Q68CQ1 1323 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 M0QZ92 97 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 SOX5P35711 763 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 TNFSF9P41273 254 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 MFAP3P55082 362 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 APBA1Q02410 837 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 MTF1Q14872 753 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 DRAP1Q14919 205 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 TMEM132AQ24JP5 1023 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 TRIM71Q2Q1W2 868 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 FAM71AQ8IYT1 594 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 HELQQ8TDG4 1101 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 TMEM40Q8WWA1 233 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 SHC3Q92529 594 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 DHX38Q92620 1227 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 TAF4BQ92750 862 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 ZNF668Q96K58 619 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 NT5C1BQ96P26 610 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 OSMRQ99650 979 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 TRAIPQ9BWF2 469 aa11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 FAM124BQ9H5Z6 455 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-203ENST00000570300 TOPORSQ9NS56 1045 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms