RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 FIGNL1Q6PIW4 674 aa10.15□□□□□ -0.78
CAPN3-219ENST00000569136 ABI1Q8IZP0 508 aa10.15□□□□□ -0.78
CAPN3-219ENST00000569136 MMTAG2Q9BU76 263 aaKnown RBP10.15□□□□□ -0.78
CAPN3-219ENST00000569136 C11orf84Q9BUA3 381 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-219ENST00000569136 POLR3FQ9H1D9 316 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-219ENST00000569136 CERS4Q9HA82 394 aa10.15□□□□□ -0.78
CAPN3-219ENST00000569136 C17orf75Q9HAS0 396 aa10.15□□□□□ -0.78
CAPN3-219ENST00000569136 RC3H2Q9HBD1 1191 aaKnown RBP10.15□□□□□ -0.78
CAPN3-219ENST00000569136 UBN1Q9NPG3 1134 aa10.15□□□□□ -0.78
CAPN3-219ENST00000569136 SEPT3Q9UH03 358 aa10.15□□□□□ -0.78
CAPN3-219ENST00000569136 PCDHB12Q9Y5F1 795 aa10.15□□□□□ -0.78
CAPN3-219ENST00000569136 SRPRBQ9Y5M8 271 aaKnown RBP10.15□□□□□ -0.78
CAPN3-219ENST00000569136 ADGRA3Q8IWK6 1321 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 A0A0C4DFX4 3053 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 TBKBP1A7MCY6 615 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 NCK2O43639 380 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 SCP2P22307 547 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 FGFR4P22455 802 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 DDIT3P35638 169 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 NAMPTP43490 491 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 GRB10Q13322 594 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 GPM6BQ13491 265 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 BECN1Q14457 450 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 ZRSR1Q15695 479 aaKnown RBP10.14□□□□□ -0.79
CAPN3-219ENST00000569136 HIF1AQ16665 826 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 FAM187BQ17R55 369 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 C16orf46Q6P387 395 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 NOTUMQ6P988 496 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 C1orf186Q6ZWK4 172 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 MRPL10Q7Z7H8 261 aaKnown RBP10.14□□□□□ -0.79
CAPN3-219ENST00000569136 CABP7Q86V35 215 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 NLRP8Q86W28 1048 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 ZBTB8OSQ8IWT0 167 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 HACE1Q8IYU2 909 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 SYT2Q8N9I0 419 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-219ENST00000569136 SLC17A8Q8NDX2 589 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 DEPTORQ8TB45 409 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 ASAP3Q8TDY4 903 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 NANOS1Q8WY41 292 aaKnown RBP10.14□□□□□ -0.79
CAPN3-219ENST00000569136 P2RX5Q93086 422 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 SUSD3Q96L08 255 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 C17orf80Q9BSJ5 609 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 ZCCHC2Q9C0B9 1178 aaKnown RBP10.14□□□□□ -0.79
CAPN3-219ENST00000569136 CCSER1Q9C0I3 900 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 LMAN2LQ9H0V9 348 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 AGPAT5Q9NUQ2 364 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 PRMT7Q9NVM4 692 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-219ENST00000569136 KANSL3Q9P2N6 904 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 CCDC39Q9UFE4 941 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 PIN4Q9Y237 131 aaKnown RBP10.14□□□□□ -0.79
CAPN3-219ENST00000569136 PCDHB2Q9Y5E7 798 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 CLIC4Q9Y696 253 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 MTCH2Q9Y6C9 303 aa10.14□□□□□ -0.79
CAPN3-219ENST00000569136 A0A1B0GUA9 196 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 DCDC2BA2VCK2 349 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 LRRIQ4A6NIV6 560 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 RFXAPO00287 272 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 ATXN7O15265 892 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-219ENST00000569136 LPXNO60711 386 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 ARHGEF15O94989 841 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 PLA2G4BP0C869 781 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 GUCY2CP25092 1073 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 CAPSQ13938 189 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 PTPAQ15257 358 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 MAPK6Q16659 721 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 CDCA2Q69YH5 1023 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-219ENST00000569136 RINT1Q6NUQ1 792 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 GLB1LQ6UWU2 654 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 MAEAQ7L5Y9 396 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 APBB1IPQ7Z5R6 666 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-219ENST00000569136 MRPL38Q96DV4 380 aaKnown RBP10.13□□□□□ -0.79
CAPN3-219ENST00000569136 DRC1Q96MC2 740 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 CASD1Q96PB1 797 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 NTPCRQ9BSD7 190 aaKnown RBP10.13□□□□□ -0.79
CAPN3-219ENST00000569136 MRPL9Q9BYD2 267 aaKnown RBP10.13□□□□□ -0.79
CAPN3-219ENST00000569136 FZD8Q9H461 694 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 MINDY3Q9H8M7 445 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 FAM105AQ9NUU6 356 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 TYW1Q9NV66 732 aaKnown RBP10.13□□□□□ -0.79
CAPN3-219ENST00000569136 PUF60Q9UHX1 559 aaKnown RBP10.13□□□□□ -0.79
CAPN3-219ENST00000569136 CFAP45Q9UL16 551 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 MTUS1Q9ULD2 1270 aa10.13□□□□□ -0.79
CAPN3-219ENST00000569136 GPC6Q9Y625 555 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-219ENST00000569136 EPOPA6NHQ4 379 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 PP2D1A8MPX8 630 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 E9PMD0 336 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 H0YCG3 227 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 K7ERI5 159 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 ACKR2O00590 384 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 KHNYNO15037 678 aaKnown RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 THBS1P07996 1170 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 ZSCAN22P10073 491 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 LAG3P18627 525 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 IBSPP21815 317 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 MARCKSP29966 332 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 CTNNB1P35222 781 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 NASPP49321 788 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 ALDH7A1P49419 539 aaKnown RBP10.12□□□□□ -0.79
CAPN3-219ENST00000569136 KRT17Q04695 432 aa10.12□□□□□ -0.79
CAPN3-219ENST00000569136 UBE3AQ05086 875 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms