RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 MAMDC2Q7Z304 686 aaPredicted RBP9.17□□□□□ -0.94
CDH11-216ENST00000569128 BRAPQ7Z569 592 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 PNMA8AQ86V59 439 aaPredicted RBP9.17□□□□□ -0.94
CDH11-216ENST00000569128 ZNF444Q8N0Y2 327 aaPredicted RBP9.17□□□□□ -0.94
CDH11-216ENST00000569128 GSTCDQ8NEC7 633 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 IGDCC4Q8TDY8 1250 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 LINC01599Q8WXQ3 324 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 MMP19Q99542 508 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 YIPF4Q9BSR8 244 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 KRT23Q9C075 422 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 IL17RBQ9NRM6 502 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 TMEM59LQ9UK28 342 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 SSC5DA1L4H1 1573 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 TRBV23OR9-2A0A075B6M9 112 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 TSPY2A6NKD2 308 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 LARGE1O95461 756 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 GUCY1A2P33402 732 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 MCM5P33992 734 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 HK2P52789 917 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 DUSP4Q13115 394 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 TESK1Q15569 626 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 CERKLQ49MI3 558 aaPredicted RBP9.16□□□□□ -0.94
CDH11-216ENST00000569128 HLA-DQA1Q5Y7H0 255 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 IQCEQ6IPM2 695 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 TATDN1Q6P1N9 297 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 MOB2Q70IA6 237 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 RAB11FIP4Q86YS3 637 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 RCBTB1Q8NDN9 531 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 ESR2Q92731 530 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 CDCA5Q96FF9 252 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 TTC1Q99614 292 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 CHST12Q9NRB3 414 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 TNFRSF10DQ9UBN6 386 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 SWAP70Q9UH65 585 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 TNPO3Q9Y5L0 923 aaKnown RBP9.16□□□□□ -0.94
CDH11-216ENST00000569128 NPFFR2Q9Y5X5 522 aa9.16□□□□□ -0.94
CDH11-216ENST00000569128 IGKV6D-41A0A0C4DH26 115 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.15□□□□□ -0.94
CDH11-216ENST00000569128 FADS2P1A8MWK0 482 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 MPHOSPH10O00566 681 aaKnown RBP9.15□□□□□ -0.94
CDH11-216ENST00000569128 SH2B2O14492 632 aaPredicted RBP9.15□□□□□ -0.94
CDH11-216ENST00000569128 IFIT3O14879 490 aaKnown RBP9.15□□□□□ -0.94
CDH11-216ENST00000569128 OPA1O60313 960 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 USP2O75604 605 aaPredicted RBP9.15□□□□□ -0.94
CDH11-216ENST00000569128 RFPL1O75677 317 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 WNT11O96014 354 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 GH2P01242 217 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 TSPY3P0CV98 308 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 TSPY8P0CW00 308 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 SEPT2Q15019 361 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 PLCL1Q15111 1095 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 SEC23AQ15436 765 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 SEPT7Q16181 437 aaKnown RBP9.15□□□□□ -0.94
CDH11-216ENST00000569128 GFOD2Q3B7J2 385 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 SLC23A3Q6PIS1 610 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 TP53INP2Q8IXH6 220 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 USP7Q93009 1102 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 LY9Q9HBG7 655 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 GPR27Q9NS67 375 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 HERC5Q9UII4 1024 aaKnown RBP9.15□□□□□ -0.94
CDH11-216ENST00000569128 ZNF180Q9UJW8 692 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 TRHDEQ9UKU6 1024 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 TPCN1Q9ULQ1 816 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 PPP2R3BQ9Y5P8 575 aa9.15□□□□□ -0.94
CDH11-216ENST00000569128 TNKSO95271 1327 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 C7orf72A4D263 438 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 IFRD1O00458 451 aaPredicted RBP9.14□□□□□ -0.95
CDH11-216ENST00000569128 MSCO60682 206 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 PCP11498 1178 aaKnown RBP9.14□□□□□ -0.95
CDH11-216ENST00000569128 PAX3P23760 479 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 IGFALSP35858 605 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 FLT3P36888 993 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 DHX8Q14562 1220 aaKnown RBP9.14□□□□□ -0.95
CDH11-216ENST00000569128 ABCB5Q2M3G0 1257 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 SYDE2Q5VT97 1194 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 RSPO2Q6UXX9 243 aaPredicted RBP9.14□□□□□ -0.95
CDH11-216ENST00000569128 FGD2Q7Z6J4 655 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 LDHDQ86WU2 507 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 SIAH1Q8IUQ4 282 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 ENAHQ8N8S7 591 aaPredicted RBP9.14□□□□□ -0.95
CDH11-216ENST00000569128 NECAB1Q8N987 351 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 SVIPQ8NHG7 77 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 ZKSCAN4Q969J2 545 aaPredicted RBP9.14□□□□□ -0.95
CDH11-216ENST00000569128 CEP95Q96GE4 821 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 SCLYQ96I15 445 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 MYL10Q9BUA6 226 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 AGXT2Q9BYV1 514 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 TRIM8Q9BZR9 551 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 ALDH8A1Q9H2A2 487 aaPredicted RBP9.14□□□□□ -0.95
CDH11-216ENST00000569128 IFT22Q9H7X7 185 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 ZNF112Q9UJU3 913 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 ADAMTS6Q9UKP5 1117 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 PCDHA9Q9Y5H5 950 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 PCDHA2Q9Y5H9 948 aa9.14□□□□□ -0.95
CDH11-216ENST00000569128 KLF18A0A0U1RQI7 1052 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 AQP7O14520 342 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 GABRDO14764 452 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 SH3BP5O60239 455 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 ZEB2O60315 1214 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 KPNA6O60684 536 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms