RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PABPC5Q96DU9 382 aaKnown RBP6.59□□□□□ -1.35
CDH13-211ENST00000568770 MPHOSPH6Q99547 160 aaKnown RBP6.59□□□□□ -1.35
CDH13-211ENST00000568770 TM9SF2Q99805 663 aa6.59□□□□□ -1.35
CDH13-211ENST00000568770 RANBP17Q9H2T7 1088 aaKnown RBP6.59□□□□□ -1.35
CDH13-211ENST00000568770 LRRC4CQ9HCJ2 640 aa6.59□□□□□ -1.35
CDH13-211ENST00000568770 IL17RBQ9NRM6 502 aa6.59□□□□□ -1.35
CDH13-211ENST00000568770 CLDND1Q9NY35 253 aa6.59□□□□□ -1.35
CDH13-211ENST00000568770 GTF2IRD1Q9UHL9 959 aa6.59□□□□□ -1.35
CDH13-211ENST00000568770 STRIP2Q9ULQ0 834 aa6.59□□□□□ -1.35
CDH13-211ENST00000568770 TPX2Q9ULW0 747 aaKnown RBP6.59□□□□□ -1.35
CDH13-211ENST00000568770 PLXNA4Q9HCM2 1894 aa6.59□□□□□ -1.35
CDH13-211ENST00000568770 TSPY2A6NKD2 308 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 H3BNC9 293 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 RNF113AO15541 343 aaKnown RBP6.58□□□□□ -1.36
CDH13-211ENST00000568770 HMMRO75330 724 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 AMHP03971 560 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 SLC3A2P08195 630 aaKnown RBP6.58□□□□□ -1.36
CDH13-211ENST00000568770 EDNRBP24530 442 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 LTBRP36941 435 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 OXCT1P55809 520 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 RPS6P62753 249 aaKnown RBP6.58□□□□□ -1.36
CDH13-211ENST00000568770 DLX2Q07687 328 aaPredicted RBP6.58□□□□□ -1.36
CDH13-211ENST00000568770 PPARAQ07869 468 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 SMAD2Q15796 467 aaKnown RBP6.58□□□□□ -1.36
CDH13-211ENST00000568770 CLUL1Q15846 466 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 LY6KQ17RY6 165 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 CYP27C1Q4G0S4 372 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 HERC4Q5GLZ8 1057 aaPredicted RBP6.58□□□□□ -1.36
CDH13-211ENST00000568770 CHST3Q7LGC8 479 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 MYOCDQ8IZQ8 938 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 TAB3Q8N5C8 712 aaPredicted RBP6.58□□□□□ -1.36
CDH13-211ENST00000568770 C7orf31Q8N865 590 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 KBTBD3Q8NAB2 608 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 DNERQ8NFT8 737 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 DCAF4Q8WV16 495 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 CLEC4DQ8WXI8 215 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 Q96M66 194 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 KREMEN1Q96MU8 473 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 SAMD11Q96NU1 681 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 NSUN3Q9H649 340 aaKnown RBP6.58□□□□□ -1.36
CDH13-211ENST00000568770 INCENPQ9NQS7 918 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 HDAC6Q9UBN7 1215 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 PLAGL2Q9UPG8 496 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 CACNA1HO95180 2353 aa6.58□□□□□ -1.36
CDH13-211ENST00000568770 MYO10Q9HD67 2058 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 FRMPD2Q68DX3 1309 aaPredicted RBP6.57□□□□□ -1.36
CDH13-211ENST00000568770 EMSYQ7Z589 1322 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 B4DLN1 442 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 MBTPS2O43462 519 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 SMARCA5O60264 1052 aaPredicted RBP6.57□□□□□ -1.36
CDH13-211ENST00000568770 CBX7O95931 251 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 GH1P01241 217 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 ZFYP08048 801 aaPredicted RBP6.57□□□□□ -1.36
CDH13-211ENST00000568770 ATP2B1P20020 1258 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 CASTP20810 708 aaKnown RBP6.57□□□□□ -1.36
CDH13-211ENST00000568770 MRPL12P52815 198 aaKnown RBP6.57□□□□□ -1.36
CDH13-211ENST00000568770 ZNF200P98182 395 aaPredicted RBP6.57□□□□□ -1.36
CDH13-211ENST00000568770 CYP27A1Q02318 531 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 ARHGAP1Q07960 439 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 TCF15Q12870 199 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 PPP2R5EQ16537 467 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 DGKDQ16760 1214 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 TRIM71Q2Q1W2 868 aaKnown RBP6.57□□□□□ -1.36
CDH13-211ENST00000568770 SYDE2Q5VT97 1194 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 CCDC62Q6P9F0 684 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 BTNL9Q6UXG8 535 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 SEPT14Q6ZU15 432 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 RPAINQ86UA6 219 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 DBF4BQ8NFT6 615 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 MICAL1Q8TDZ2 1067 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 EDAQ92838 391 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 TOP1MTQ969P6 601 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 SLC6A18Q96N87 628 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 YME1L1Q96TA2 773 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 SEC62Q99442 399 aaKnown RBP6.57□□□□□ -1.36
CDH13-211ENST00000568770 ALG1Q9BT22 464 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 NACAP1Q9BZK3 213 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 NAPBQ9H115 298 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 ECHDC1Q9NTX5 307 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 ZC3H7BQ9UGR2 993 aaKnown RBP6.57□□□□□ -1.36
CDH13-211ENST00000568770 PCDHB10Q9UN67 800 aa6.57□□□□□ -1.36
CDH13-211ENST00000568770 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.57□□□□□ -1.36
CDH13-211ENST00000568770 RIF1Q5UIP0 2472 aaKnown RBP6.56□□□□□ -1.36
CDH13-211ENST00000568770 TTC3P53804 2025 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 TMEM221A6NGB7 291 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 RSPH10B2B2RC85 870 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 C9IYK1 514 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 M0R296 226 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 STXBP3O00186 592 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 HAS3O00219 553 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 CYP26A1O43174 497 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 NCK2O43639 380 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 RANBP6O60518 1105 aaKnown RBP6.56□□□□□ -1.36
CDH13-211ENST00000568770 RSPH10BP0C881 870 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 ZNF286BP0CG31 522 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 GTF2F1P35269 517 aaKnown RBP eCLIP6.56□□□□□ -1.36
CDH13-211ENST00000568770 THPOP40225 353 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 NOVP48745 357 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 HYAL1Q12794 435 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 KIAA0753Q2KHM9 967 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms