RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 CCDC113Q9H0I3 377 aa17.14■□□□□ 0.33
NME3-211ENST00000568561 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.14■□□□□ 0.331e-9■■■■■ 33.5
NME3-211ENST00000568561 R4GN57 208 aa17.14■□□□□ 0.33
NME3-211ENST00000568561 ARHGEF35A5YM69 484 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 ANHXE9PGG2 379 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 CCL16O15467 120 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 THP07101 528 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 C8AP07357 584 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 ZNF174Q15697 407 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 MAPK6Q16659 721 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 FAM187BQ17R55 369 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 PPM1LQ5SGD2 360 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 LIN9Q5TKA1 542 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 PARM1Q6UWI2 310 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 GPR65Q8IYL9 337 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 FGF14Q92915 247 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 NACC1Q96RE7 527 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 POLR3CQ9BUI4 534 aaPredicted RBP17.13■□□□□ 0.33
NME3-211ENST00000568561 FOXQ1Q9C009 403 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 C2orf40Q9H1Z8 148 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 POLIQ9UNA4 740 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 DCHS1Q96JQ0 3298 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 CACNA1AO00555 2505 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 FANCMQ8IYD8 2048 aa17.13■□□□□ 0.33
NME3-211ENST00000568561 LRRN2O75325 713 aa17.12■□□□□ 0.33
NME3-211ENST00000568561 C1RP00736 705 aa17.12■□□□□ 0.33
NME3-211ENST00000568561 OR52Z1P0C646 297 aa17.12■□□□□ 0.33
NME3-211ENST00000568561 CYP11B2P19099 503 aa17.12■□□□□ 0.33
NME3-211ENST00000568561 DEPTORQ8TB45 409 aa17.12■□□□□ 0.33
NME3-211ENST00000568561 SLC7A14Q8TBB6 771 aa17.12■□□□□ 0.33
NME3-211ENST00000568561 NXPE3Q969Y0 559 aa17.12■□□□□ 0.33
NME3-211ENST00000568561 ADPGKQ9BRR6 497 aa17.12■□□□□ 0.33
NME3-211ENST00000568561 OTOGLQ3ZCN5 2332 aa17.12■□□□□ 0.33
NME3-211ENST00000568561 I3L4J1 428 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 ACKR2O00590 384 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 OR1D2P34982 312 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 NAMPTP43490 491 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 GPC5P78333 572 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 NBR1Q14596 966 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
NME3-211ENST00000568561 ECM1Q16610 540 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 DCLRE1AQ6PJP8 1040 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 ERMNQ8TAM6 284 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 ITFG1Q8TB96 612 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 KCNG4Q8TDN1 519 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 GOLGA2P5Q9HBQ8 144 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 HCFC1R1Q9NWW0 138 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 CDH7Q9ULB5 785 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 PATJQ8NI35 1801 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 FRYLO94915 3013 aa17.11■□□□□ 0.33
NME3-211ENST00000568561 DMXL1Q9Y485 3027 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 CEP250Q9BV73 2442 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 CITO14578 2027 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 HNRNPA1P09651 372 aaKnown RBP eCLIP17.1■□□□□ 0.33
NME3-211ENST00000568561 RPA1P27694 616 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 AXDND1Q5T1B0 1012 aaPredicted RBP17.1■□□□□ 0.33
NME3-211ENST00000568561 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 RSPO2Q6UXX9 243 aaPredicted RBP17.1■□□□□ 0.33
NME3-211ENST00000568561 CCDC83Q8IWF9 413 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 CEP120Q8N960 986 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 ING5Q8WYH8 240 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 FGF13Q92913 245 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 C8orf76Q96K31 380 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 KXD1Q9BQD3 176 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 BHMT2Q9H2M3 363 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 SLC2A4RGQ9NR83 387 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 DLGAP2Q9P1A6 1054 aa17.1■□□□□ 0.33
NME3-211ENST00000568561 GPR179Q6PRD1 2367 aa17.09■□□□□ 0.33
NME3-211ENST00000568561 GLULP15104 373 aa17.09■□□□□ 0.33
NME3-211ENST00000568561 CCT6AP40227 531 aaKnown RBP17.09■□□□□ 0.33
NME3-211ENST00000568561 CLCNKBP51801 687 aa17.09■□□□□ 0.33
NME3-211ENST00000568561 ELAVL2Q12926 359 aaKnown RBP17.09■□□□□ 0.33
NME3-211ENST00000568561 TTC38Q5R3I4 469 aa17.09■□□□□ 0.33
NME3-211ENST00000568561 ATF7IP2Q5U623 682 aa17.09■□□□□ 0.33
NME3-211ENST00000568561 PHLDB3Q6NSJ2 640 aa17.09■□□□□ 0.33
NME3-211ENST00000568561 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.09■□□□□ 0.33
NME3-211ENST00000568561 C3orf58Q8NDZ4 430 aa17.09■□□□□ 0.33
NME3-211ENST00000568561 PPP1R10Q96QC0 940 aaKnown RBP17.09■□□□□ 0.33
NME3-211ENST00000568561 SIT1Q9Y3P8 196 aa17.09■□□□□ 0.33
NME3-211ENST00000568561 CDY1Q9Y6F8 540 aa17.09■□□□□ 0.33
NME3-211ENST00000568561 XYLBO75191 536 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 B3GAT3O94766 335 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 SEC24BO95487 1268 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 NEFLP07196 543 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 FGFR3P22607 806 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 TKTP29401 623 aaKnown RBP17.08■□□□□ 0.32
NME3-211ENST00000568561 BRCC3P46736 316 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 OSTNP61366 133 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 SOX4Q06945 474 aaPredicted RBP17.08■□□□□ 0.32
NME3-211ENST00000568561 SNW1Q13573 536 aaKnown RBP17.08■□□□□ 0.32
NME3-211ENST00000568561 PPP2R5AQ15172 486 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 DCAF4L1Q3SXM0 396 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 CD300LGQ6UXG3 332 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 PJA1Q8NG27 643 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 DDX27Q96GQ7 796 aaKnown RBP17.08■□□□□ 0.32
NME3-211ENST00000568561 IFT74Q96LB3 600 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 MTRRQ9UBK8 725 aa17.08■□□□□ 0.32
NME3-211ENST00000568561 ZFP37Q9Y6Q3 630 aaPredicted RBP17.08■□□□□ 0.32
NME3-211ENST00000568561 PDCD11Q14690 1871 aaKnown RBP17.07■□□□□ 0.32
NME3-211ENST00000568561 HOXA9P31269 272 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms