RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 ODF2LQ9ULJ1 636 aa15.83■□□□□ 0.12
CMTM3-215ENST00000568477 TECTAO75443 2155 aa15.83■□□□□ 0.12
CMTM3-215ENST00000568477 H0YCG3 227 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 BRD1O95696 1058 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 MAPTP10636 758 aaKnown RBP15.82■□□□□ 0.12
CMTM3-215ENST00000568477 PROZP22891 400 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 OSTNP61366 133 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 DHX8Q14562 1220 aaKnown RBP15.82■□□□□ 0.12
CMTM3-215ENST00000568477 KARSQ15046 597 aaKnown RBP15.82■□□□□ 0.12
CMTM3-215ENST00000568477 ARSHQ5FYA8 562 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 GPR149Q86SP6 731 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 CMASQ8NFW8 434 aaPredicted RBP15.82■□□□□ 0.12
CMTM3-215ENST00000568477 RAD54LQ92698 747 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 UROC1Q96N76 676 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 PPP1R10Q96QC0 940 aaKnown RBP15.82■□□□□ 0.12
CMTM3-215ENST00000568477 TTPALQ9BTX7 342 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 BLOC1S4Q9NUP1 217 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 FNIP2Q9P278 1114 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 ANKFY1Q9P2R3 1169 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 CLIC4Q9Y696 253 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 MYH11P35749 1972 aa15.82■□□□□ 0.12
CMTM3-215ENST00000568477 SMIM28A0A1B0GU29 152 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 C2CD4DB7Z1M9 353 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 ABLIM1O14639 778 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 TOM1L1O75674 476 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 FAM13AO94988 1023 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 C1RP00736 705 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 KRT18P05783 430 aaKnown RBP15.81■□□□□ 0.12
CMTM3-215ENST00000568477 HARSP12081 509 aaKnown RBP15.81■□□□□ 0.12
CMTM3-215ENST00000568477 ZXDAP98168 799 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 MCM6Q14566 821 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 NOLC1Q14978 699 aaKnown RBP eCLIP15.81■□□□□ 0.12
CMTM3-215ENST00000568477 PTPAQ15257 358 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 PTPN21Q16825 1174 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 RTP2Q5QGT7 225 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 FAM171A1Q5VUB5 890 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 MUC6Q6W4X9 2439 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 ZPBP2Q6X784 338 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 C15orf39Q6ZRI6 1047 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 CCDC149Q6ZUS6 474 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 CEP57Q86XR8 500 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 TDRD5Q8NAT2 981 aaKnown RBP15.81■□□□□ 0.12
CMTM3-215ENST00000568477 LRRC15Q8TF66 581 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 SNX27Q96L92 541 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 ACAP3Q96P50 834 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 REEP2Q9BRK0 252 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 MTMR6Q9Y217 621 aa15.81■□□□□ 0.12
CMTM3-215ENST00000568477 TMEM189-UBE2V1I3L0A0 370 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 B3GAT3O94766 335 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 RPL17P18621 184 aaKnown RBP15.8■□□□□ 0.12
CMTM3-215ENST00000568477 SCP2P22307 547 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 MARCKSP29966 332 aaPredicted RBP15.8■□□□□ 0.12
CMTM3-215ENST00000568477 NCKAP1LP55160 1127 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 XKR4Q5GH76 650 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 FAM173BQ6P4H8 233 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 PDXDC1Q6P996 788 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 DCLRE1AQ6PJP8 1040 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 PRSS55Q6UWB4 352 aaPredicted RBP15.8■□□□□ 0.12
CMTM3-215ENST00000568477 TRIM67Q6ZTA4 783 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 HAUS6Q7Z4H7 955 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 PALB2Q86YC2 1186 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 GLYCTKQ8IVS8 523 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 HDAC7Q8WUI4 952 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 PIK3R5Q8WYR1 880 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 LARP4BQ92615 738 aaKnown RBP15.8■□□□□ 0.12
CMTM3-215ENST00000568477 BICD1Q96G01 975 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 ZBTB45Q96K62 511 aaPredicted RBP15.8■□□□□ 0.12
CMTM3-215ENST00000568477 CCSER1Q9C0I3 900 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 PLEKHA4Q9H4M7 779 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 PARVGQ9HBI0 331 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 SLC38A7Q9NVC3 462 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 USTQ9Y2C2 406 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 ZDBF2Q9HCK1 2354 aa15.8■□□□□ 0.12
CMTM3-215ENST00000568477 K7ENM7 598 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 CLDN3O15551 220 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 TGM5O43548 720 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 TBCAO75347 108 aaKnown RBP15.79■□□□□ 0.12
CMTM3-215ENST00000568477 SPATA31D3P0C874 917 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 MYBP10242 640 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 MATR3P43243 847 aaKnown RBP eCLIP15.79■□□□□ 0.12
CMTM3-215ENST00000568477 CLCNKBP51801 687 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 CEBPZQ03701 1054 aaKnown RBP15.79■□□□□ 0.12
CMTM3-215ENST00000568477 PSMD5Q16401 504 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 ALKAL1Q6UXT8 129 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 CYP26C1Q6V0L0 522 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.79■□□□□ 0.12
CMTM3-215ENST00000568477 SPATA31D4Q6ZUB0 917 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 HFE2Q6ZVN8 426 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 ZDHHC14Q8IZN3 488 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 MYCT1Q8N699 235 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 FEZF2Q8TBJ5 459 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 KCNN1Q92952 543 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 DDX27Q96GQ7 796 aaKnown RBP15.79■□□□□ 0.12
CMTM3-215ENST00000568477 ZHX3Q9H4I2 956 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 ZSCAN16Q9H4T2 348 aaPredicted RBP15.79■□□□□ 0.12
CMTM3-215ENST00000568477 GOLGA2P5Q9HBQ8 144 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 CCDC39Q9UFE4 941 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 FBXO2Q9UK22 296 aaPredicted RBP15.79■□□□□ 0.12
CMTM3-215ENST00000568477 SRPRBQ9Y5M8 271 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms