RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 TMEM117Q9H0C3 514 aa11.32□□□□□ -0.6
TCF4-236ENST00000567880 AGPAT5Q9NUQ2 364 aa11.32□□□□□ -0.6
TCF4-236ENST00000567880 CPSF3Q9UKF6 684 aaKnown RBP11.32□□□□□ -0.6
TCF4-236ENST00000567880 NOC2LQ9Y3T9 749 aaKnown RBP11.32□□□□□ -0.6
TCF4-236ENST00000567880 RALGAPA2Q2PPJ7 1873 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 POM121CA8CG34 1229 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 STX10O60499 249 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 RPS6KA5O75582 802 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 RPLP2P05387 115 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 CXCL8P10145 99 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 PON1P27169 355 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 HOXA11P31270 313 aaPredicted RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 KRT9P35527 623 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 PCBP1Q15365 356 aaKnown RBP eCLIP11.31□□□□□ -0.6
TCF4-236ENST00000567880 PKN2Q16513 984 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 SLC27A1Q6PCB7 646 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 FAM228AQ86W67 206 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 CNGA4Q8IV77 575 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 BRSK2Q8IWQ3 736 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 U2AF1L4Q8WU68 220 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 NLRC4Q9NPP4 1024 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.31□□□□□ -0.64e-6■■■■■ 111.8
TCF4-236ENST00000567880 LUC7L2Q9Y383 392 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 PDCD11Q14690 1871 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 PTPRJQ12913 1337 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 GTPBP10A4D1E9 387 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 N4BP1O75113 896 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 SGPL1O95470 568 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 STAG3L1P0CL83 205 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 POLR2FP61218 127 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 MGAT3Q09327 533 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 CETN1Q12798 172 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 ENOX2Q16206 610 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 ZNF618Q5T7W0 954 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 TRIM65Q6PJ69 517 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 CACNA2D4Q7Z3S7 1137 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 RPAINQ86UA6 219 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 SLC43A3Q8NBI5 491 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 EIF2AQ9BY44 585 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 TTYH3Q9C0H2 523 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 RPF1Q9H9Y2 349 aaKnown RBP11.31□□□□□ -0.6
TCF4-236ENST00000567880 CAPN11Q9UMQ6 739 aa11.31□□□□□ -0.6
TCF4-236ENST00000567880 ANKRD62A6NC57 917 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 LRRN2O75325 713 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 GHRP10912 638 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 AXLP30530 894 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 BIRC3Q13489 604 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 TRIM71Q2Q1W2 868 aaKnown RBP11.3□□□□□ -0.6
TCF4-236ENST00000567880 DCAF4L1Q3SXM0 396 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 KRT39Q6A163 491 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 SV2AQ7L0J3 742 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 APBB1IPQ7Z5R6 666 aaPredicted RBP11.3□□□□□ -0.6
TCF4-236ENST00000567880 ZNF397Q8NF99 534 aaPredicted RBP11.3□□□□□ -0.6
TCF4-236ENST00000567880 CGRRF1Q99675 332 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
TCF4-236ENST00000567880 OSBPL7Q9BZF2 842 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 INTS2Q9H0H0 1204 aaKnown RBP11.3□□□□□ -0.6
TCF4-236ENST00000567880 TMEM8AQ9HCN3 771 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 ABHD10Q9NUJ1 306 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 ST3GAL5Q9UNP4 418 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 HES2Q9Y543 173 aa11.3□□□□□ -0.6
TCF4-236ENST00000567880 SCN5AQ14524 2016 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 NRDCO43847 1150 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 PQBP1O60828 265 aaKnown RBP11.29□□□□□ -0.6
TCF4-236ENST00000567880 NOL4O94818 638 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 CLTAP09496 248 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 CKBP12277 381 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 SKILP12757 684 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 RFX1P22670 979 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 CCZ1BP86790 482 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 CCZ1P86791 482 aaPredicted RBP11.29□□□□□ -0.6
TCF4-236ENST00000567880 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 FIGNQ5HY92 759 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 TWF2Q6IBS0 349 aaKnown RBP11.29□□□□□ -0.6
TCF4-236ENST00000567880 GJB7Q6PEY0 223 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 RRAGAQ7L523 313 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 FAM126BQ8IXS8 530 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 OR5B17Q8NGF7 314 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 GLMNQ92990 594 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 ARMC5Q96C12 935 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 APOL6Q9BWW8 343 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 CRISPLD2Q9H0B8 497 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 AGO3Q9H9G7 860 aaKnown RBP11.29□□□□□ -0.6
TCF4-236ENST00000567880 P4HA2O15460 535 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 UCHL3P15374 230 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 CD52P31358 61 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 GTF2H1P32780 548 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 CDK7P50613 346 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 ZBED6P86452 979 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 TFAMQ00059 246 aaKnown RBP11.29□□□□□ -0.6
TCF4-236ENST00000567880 ENPEPQ07075 957 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 RAPGEF1Q13905 1077 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 FBXO47Q5MNV8 452 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 KLHDC7AQ5VTJ3 777 aa11.29□□□□□ -0.6
TCF4-236ENST00000567880 TAS1R2Q8TE23 839 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms