RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 CCL16O15467 120 aa25.32■■□□□ 1.64
CNEP1R1-209ENST00000567712 GUCY1B3Q02153 619 aa25.32■■□□□ 1.64
CNEP1R1-209ENST00000567712 PSMD5Q16401 504 aa25.32■■□□□ 1.64
CNEP1R1-209ENST00000567712 CD300LGQ6UXG3 332 aa25.32■■□□□ 1.64
CNEP1R1-209ENST00000567712 KIFC3Q9BVG8 833 aa25.32■■□□□ 1.64
CNEP1R1-209ENST00000567712 FOXQ1Q9C009 403 aa25.32■■□□□ 1.64
CNEP1R1-209ENST00000567712 SLC2A4RGQ9NR83 387 aa25.32■■□□□ 1.64
CNEP1R1-209ENST00000567712 OTOGLQ3ZCN5 2332 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 N4BP3O15049 544 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 THP07101 528 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 C8AP07357 584 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 LIG1P18858 919 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 GPC5P78333 572 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 CREMQ03060 361 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 PRPF4BQ13523 1007 aaKnown RBP25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 ECM1Q16610 540 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 PHLDB3Q6NSJ2 640 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 PADI6Q6TGC4 694 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 RSPO2Q6UXX9 243 aaPredicted RBP25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 ZBTB8OSQ8IWT0 167 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 MCPH1Q8NEM0 835 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 ITFG1Q8TB96 612 aa25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 POLR3CQ9BUI4 534 aaPredicted RBP25.31■■□□□ 1.64
CNEP1R1-209ENST00000567712 PRKCBP05771 671 aa25.3■■□□□ 1.64
CNEP1R1-209ENST00000567712 DCLRE1AQ6PJP8 1040 aa25.3■■□□□ 1.64
CNEP1R1-209ENST00000567712 POTEHQ6S545 545 aa25.3■■□□□ 1.64
CNEP1R1-209ENST00000567712 NACC1Q96RE7 527 aa25.3■■□□□ 1.64
CNEP1R1-209ENST00000567712 HCFC1R1Q9NWW0 138 aa25.3■■□□□ 1.64
CNEP1R1-209ENST00000567712 GDAQ9Y2T3 454 aa25.3■■□□□ 1.64
CNEP1R1-209ENST00000567712 SIT1Q9Y3P8 196 aa25.3■■□□□ 1.64
CNEP1R1-209ENST00000567712 DNAH14Q0VDD8 3507 aa25.29■■□□□ 1.64
CNEP1R1-209ENST00000567712 ACKR2O00590 384 aa25.29■■□□□ 1.64
CNEP1R1-209ENST00000567712 CYP11B2P19099 503 aa25.29■■□□□ 1.64
CNEP1R1-209ENST00000567712 RFX1P22670 979 aa25.29■■□□□ 1.64
CNEP1R1-209ENST00000567712 ZNF174Q15697 407 aa25.29■■□□□ 1.64
CNEP1R1-209ENST00000567712 GLRA4Q5JXX5 417 aa25.29■■□□□ 1.64
CNEP1R1-209ENST00000567712 PPM1LQ5SGD2 360 aa25.29■■□□□ 1.64
CNEP1R1-209ENST00000567712 NT5DC1Q5TFE4 455 aa25.29■■□□□ 1.64
CNEP1R1-209ENST00000567712 FGF13Q92913 245 aa25.29■■□□□ 1.64
CNEP1R1-209ENST00000567712 CDH7Q9ULB5 785 aa25.29■■□□□ 1.64
CNEP1R1-209ENST00000567712 HNRNPA1P09651 372 aaKnown RBP eCLIP25.28■■□□□ 1.64
CNEP1R1-209ENST00000567712 MAPK6Q16659 721 aa25.28■■□□□ 1.64
CNEP1R1-209ENST00000567712 POLIQ9UNA4 740 aa25.28■■□□□ 1.64
CNEP1R1-209ENST00000567712 PATJQ8NI35 1801 aa25.28■■□□□ 1.64
CNEP1R1-209ENST00000567712 SP9P0CG40 484 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 FGFR3P22607 806 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 RPA1P27694 616 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 OR1D2P34982 312 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 STARD6P59095 220 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 SNW1Q13573 536 aaKnown RBP25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 TMEM132AQ24JP5 1023 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 LIN9Q5TKA1 542 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 MAML2Q8IZL2 1156 aaPredicted RBP25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 C3orf58Q8NDZ4 430 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 PJA1Q8NG27 643 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 SLC7A14Q8TBB6 771 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 PPP1R10Q96QC0 940 aaKnown RBP25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 C2orf40Q9H1Z8 148 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 GOLGA2P5Q9HBQ8 144 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 DNMT3BQ9UBC3 853 aaKnown RBP25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 MTF2Q9Y483 593 aaPredicted RBP25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 GPR179Q6PRD1 2367 aa25.27■■□□□ 1.64
CNEP1R1-209ENST00000567712 I3L4J1 428 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 NAMPTP43490 491 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 ID4P47928 161 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 CLCNKBP51801 687 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 NEK4P51957 841 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 RAB33AQ14088 237 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 TRIM29Q14134 588 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 AXDND1Q5T1B0 1012 aaPredicted RBP25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 C1orf210Q8IVY1 113 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 DEPTORQ8TB45 409 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 KCNG4Q8TDN1 519 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 ZFP37Q9Y6Q3 630 aaPredicted RBP25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 CACNA1AO00555 2505 aa25.26■■□□□ 1.63
CNEP1R1-209ENST00000567712 ARHGEF35A5YM69 484 aa25.25■■□□□ 1.63
CNEP1R1-209ENST00000567712 LMNAP02545 664 aaKnown RBP25.25■■□□□ 1.63
CNEP1R1-209ENST00000567712 OR52Z1P0C646 297 aa25.25■■□□□ 1.63
CNEP1R1-209ENST00000567712 TKTP29401 623 aaKnown RBP25.25■■□□□ 1.63
CNEP1R1-209ENST00000567712 HOXA9P31269 272 aa25.25■■□□□ 1.63
CNEP1R1-209ENST00000567712 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.25■■□□□ 1.63
CNEP1R1-209ENST00000567712 KXD1Q9BQD3 176 aa25.25■■□□□ 1.63
CNEP1R1-209ENST00000567712 MTRRQ9UBK8 725 aa25.25■■□□□ 1.63
CNEP1R1-209ENST00000567712 CITO14578 2027 aa25.25■■□□□ 1.63
CNEP1R1-209ENST00000567712 BRCC3P46736 316 aa25.24■■□□□ 1.63
CNEP1R1-209ENST00000567712 FOXK2Q01167 660 aa25.24■■□□□ 1.63
CNEP1R1-209ENST00000567712 SOX4Q06945 474 aaPredicted RBP25.24■■□□□ 1.63
CNEP1R1-209ENST00000567712 NBR1Q14596 966 aa25.24■■□□□ 1.63
CNEP1R1-209ENST00000567712 C4orf32Q8N8J7 132 aa25.24■■□□□ 1.63
CNEP1R1-209ENST00000567712 CEP120Q8N960 986 aa25.24■■□□□ 1.63
CNEP1R1-209ENST00000567712 ING5Q8WYH8 240 aa25.24■■□□□ 1.63
CNEP1R1-209ENST00000567712 ADPGKQ9BRR6 497 aa25.24■■□□□ 1.63
CNEP1R1-209ENST00000567712 DDX23Q9BUQ8 820 aaKnown RBP25.24■■□□□ 1.63
CNEP1R1-209ENST00000567712 CDY1Q9Y6F8 540 aa25.24■■□□□ 1.63
CNEP1R1-209ENST00000567712 TMEM189-UBE2V1I3L0A0 370 aa25.23■■□□□ 1.63
CNEP1R1-209ENST00000567712 B3GAT3O94766 335 aa25.23■■□□□ 1.63
CNEP1R1-209ENST00000567712 ELAVL2Q12926 359 aaKnown RBP25.23■■□□□ 1.63
CNEP1R1-209ENST00000567712 UPP1Q16831 310 aa25.23■■□□□ 1.63
CNEP1R1-209ENST00000567712 NPAS3Q8IXF0 933 aa25.23■■□□□ 1.63
CNEP1R1-209ENST00000567712 DDX27Q96GQ7 796 aaKnown RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms