RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 USP34Q70CQ2 3546 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 H3BNC9 293 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 CLTAP09496 248 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 MATR3P43243 847 aaKnown RBP eCLIP18.22■□□□□ 0.51
CLN6-208ENST00000567060 MRE11P49959 708 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 YARSP54577 528 aaKnown RBP18.22■□□□□ 0.51
CLN6-208ENST00000567060 KCNA1Q09470 495 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 PUS10Q3MIT2 529 aaKnown RBP18.22■□□□□ 0.51
CLN6-208ENST00000567060 TCEAL5Q5H9L2 206 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 CT47A1Q5JQC4 288 aaPredicted RBP18.22■□□□□ 0.51
CLN6-208ENST00000567060 SLC39A4Q6P5W5 647 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 CD302Q8IX05 232 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 POMGNT1Q8WZA1 660 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 YME1L1Q96TA2 773 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 MSTO1Q9BUK6 570 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 PLEKHA5Q9HAU0 1116 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 RC3H2Q9HBD1 1191 aaKnown RBP18.22■□□□□ 0.51
CLN6-208ENST00000567060 TRAF3IP3Q9Y228 551 aa18.22■□□□□ 0.51
CLN6-208ENST00000567060 C19orf67A6NJJ6 358 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 PSMA7O14818 248 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 DCXO43602 365 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 CALUO43852 315 aaPredicted RBP18.21■□□□□ 0.51
CLN6-208ENST00000567060 LETM1O95202 739 aaPredicted RBP18.21■□□□□ 0.51
CLN6-208ENST00000567060 HOXD13P35453 343 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 NHLH1Q02575 133 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 ZP2Q05996 745 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 PTPROQ16827 1216 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 ARMCX5Q6P1M9 558 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 SLC9A9Q8IVB4 645 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 MLKLQ8NB16 471 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 GLIS3Q8NEA6 775 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 URGCPQ8TCY9 931 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 PABPC5Q96DU9 382 aaKnown RBP18.21■□□□□ 0.51
CLN6-208ENST00000567060 DHTKD1Q96HY7 919 aaPredicted RBP18.21■□□□□ 0.51
CLN6-208ENST00000567060 ACAP3Q96P50 834 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 KCTD10Q9H3F6 313 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 NXF3Q9H4D5 531 aaKnown RBP18.21■□□□□ 0.51
CLN6-208ENST00000567060 AGPAT3Q9NRZ7 376 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 DACH1Q9UI36 760 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 AGO2Q9UKV8 859 aaKnown RBP18.21■□□□□ 0.51
CLN6-208ENST00000567060 GDAQ9Y2T3 454 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 RWDD3Q9Y3V2 267 aa18.21■□□□□ 0.51
CLN6-208ENST00000567060 ANKRD63C9JTQ0 380 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 TGFB1I1O43294 461 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 UPP2O95045 317 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 RPL13P26373 211 aaKnown RBP18.2■□□□□ 0.5
CLN6-208ENST00000567060 ADSSP30520 456 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 LTBRP36941 435 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 LRRC63Q05C16 580 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 GPM6BQ13491 265 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 EDRF1Q3B7T1 1238 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 AGMOQ6ZNB7 445 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 CDR2LQ86X02 465 aaPredicted RBP18.2■□□□□ 0.5
CLN6-208ENST00000567060 ADSSL1Q8N142 457 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 LRRC43Q8N309 656 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 ZBTB45Q96K62 511 aaPredicted RBP18.2■□□□□ 0.5
CLN6-208ENST00000567060 FBXL18Q96ME1 805 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 SAMD11Q96NU1 681 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 USP20Q9Y2K6 914 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 CITO14578 2027 aa18.2■□□□□ 0.5
CLN6-208ENST00000567060 BICDL2A1A5D9 508 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 EXTL3O43909 919 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 FAM189A1O60320 539 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 OFD1O75665 1012 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 ADRB2P07550 413 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 PRCPP42785 496 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 FNDC1Q4ZHG4 1894 aaPredicted RBP18.19■□□□□ 0.5
CLN6-208ENST00000567060 XKR4Q5GH76 650 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 CENPPQ6IPU0 288 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 ZBTB33Q86T24 672 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 NELFCDQ8IXH7 590 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 TMEM192Q8IY95 271 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 GPD1LQ8N335 351 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 RNF169Q8NCN4 708 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 ERCC4Q92889 916 aaPredicted RBP18.19■□□□□ 0.5
CLN6-208ENST00000567060 RPS6KC1Q96S38 1066 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 TSG101Q99816 390 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 RNF19AQ9NV58 838 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 PARP2Q9UGN5 583 aa18.19■□□□□ 0.5
CLN6-208ENST00000567060 CPSF3Q9UKF6 684 aaKnown RBP18.19■□□□□ 0.5
CLN6-208ENST00000567060 RECQL4O94761 1208 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 SURF1Q15526 300 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 TIGD5Q53EQ6 642 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 NOMO2Q5JPE7 1267 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 CLLU1OSQ5K130 101 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 NT5DC4Q86YG4 428 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 THNSL1Q8IYQ7 743 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 CASD1Q96PB1 797 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 HAPLN2Q9GZV7 340 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 ASB7Q9H672 318 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 RPF1Q9H9Y2 349 aaKnown RBP18.18■□□□□ 0.5
CLN6-208ENST00000567060 SNTG2Q9NY99 539 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 PRKAG3Q9UGI9 489 aa18.18■□□□□ 0.5
CLN6-208ENST00000567060 ARL5CA6NH57 179 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 TBKBP1A7MCY6 615 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 MAPK13O15264 365 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 IL18RAPO95256 599 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 FGFR1P11362 822 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 KCNE1P15382 129 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 CCNE1P24864 410 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms