RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 STK36Q9NRP7 1315 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 LYPLA2O95372 231 aa17.15■□□□□ 0.34
PALB2-205ENST00000567003 FOSBP53539 338 aa17.15■□□□□ 0.34
PALB2-205ENST00000567003 UBXN2BQ14CS0 331 aa17.15■□□□□ 0.34
PALB2-205ENST00000567003 MLF2Q15773 248 aaPredicted RBP17.15■□□□□ 0.34
PALB2-205ENST00000567003 SUMF1Q8NBK3 374 aa17.15■□□□□ 0.34
PALB2-205ENST00000567003 SLC7A14Q8TBB6 771 aa17.15■□□□□ 0.34
PALB2-205ENST00000567003 PIK3R5Q8WYR1 880 aa17.15■□□□□ 0.34
PALB2-205ENST00000567003 TNFRSF25Q93038 417 aa17.15■□□□□ 0.34
PALB2-205ENST00000567003 NAP1L4Q99733 375 aaKnown RBP17.15■□□□□ 0.34
PALB2-205ENST00000567003 NFKBIZQ9BYH8 718 aa17.15■□□□□ 0.34
PALB2-205ENST00000567003 TPCN1Q9ULQ1 816 aa17.15■□□□□ 0.34
PALB2-205ENST00000567003 CACNA1BQ00975 2339 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 EPG5Q9HCE0 2579 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 TPRP12270 2363 aaKnown RBP17.14■□□□□ 0.33
PALB2-205ENST00000567003 KANSL1LA0AUZ9 987 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 CDKL5O76039 1030 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 RECQL4O94761 1208 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 EDN1P05305 212 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 LIG1P18858 919 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 CALCRLQ16602 461 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 SLC44A4Q53GD3 710 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 NOSTRINQ8IVI9 506 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 BSNDQ8WZ55 320 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 SHDQ96IW2 340 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 DDX23Q9BUQ8 820 aaKnown RBP17.14■□□□□ 0.33
PALB2-205ENST00000567003 TM6SF1Q9BZW5 370 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 PDZD7Q9H5P4 517 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 ORC3Q9UBD5 711 aaPredicted RBP17.14■□□□□ 0.33
PALB2-205ENST00000567003 PCDHA12Q9UN75 941 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 ZFP37Q9Y6Q3 630 aaPredicted RBP17.14■□□□□ 0.33
PALB2-205ENST00000567003 ZMYM2Q9UBW7 1377 aa17.14■□□□□ 0.33
PALB2-205ENST00000567003 TRIP11Q15643 1979 aa17.13■□□□□ 0.33
PALB2-205ENST00000567003 KINO60870 393 aaKnown RBP17.13■□□□□ 0.33
PALB2-205ENST00000567003 HNRNPA1P09651 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
PALB2-205ENST00000567003 XBP1P17861 261 aa17.13■□□□□ 0.33
PALB2-205ENST00000567003 KRT2P35908 639 aa17.13■□□□□ 0.33
PALB2-205ENST00000567003 TXKP42681 527 aa17.13■□□□□ 0.33
PALB2-205ENST00000567003 CSTF1Q05048 431 aaKnown RBP17.13■□□□□ 0.33
PALB2-205ENST00000567003 PUM1Q14671 1186 aaKnown RBP eCLIP17.13■□□□□ 0.33
PALB2-205ENST00000567003 NAB2Q15742 525 aa17.13■□□□□ 0.33
PALB2-205ENST00000567003 RSPO4Q2I0M5 234 aaPredicted RBP17.13■□□□□ 0.33
PALB2-205ENST00000567003 RSPO2Q6UXX9 243 aaPredicted RBP17.13■□□□□ 0.33
PALB2-205ENST00000567003 MTSS1LQ765P7 747 aa17.13■□□□□ 0.33
PALB2-205ENST00000567003 NPAS3Q8IXF0 933 aa17.13■□□□□ 0.33
PALB2-205ENST00000567003 TTC12Q9H892 705 aaPredicted RBP17.13■□□□□ 0.33
PALB2-205ENST00000567003 FAM170BA6NMN3 283 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 PFKFB2O60825 505 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 XYLBO75191 536 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 OR1D2P34982 312 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 TMEM132AQ24JP5 1023 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 GLRA4Q5JXX5 417 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 AXDND1Q5T1B0 1012 aaPredicted RBP17.12■□□□□ 0.33
PALB2-205ENST00000567003 EEF1DP3Q658K8 133 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 CDCA2Q69YH5 1023 aaPredicted RBP17.12■□□□□ 0.33
PALB2-205ENST00000567003 POTEHQ6S545 545 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 TSSK4Q6SA08 328 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 BCO2Q9BYV7 579 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 PLA2G2FQ9BZM2 168 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 FZD8Q9H461 694 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 LTB4R2Q9NPC1 389 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 PRMT7Q9NVM4 692 aaPredicted RBP17.12■□□□□ 0.33
PALB2-205ENST00000567003 DLL3Q9NYJ7 618 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 DNMT3BQ9UBC3 853 aaKnown RBP17.12■□□□□ 0.33
PALB2-205ENST00000567003 GDAQ9Y2T3 454 aa17.12■□□□□ 0.33
PALB2-205ENST00000567003 I3L4J1 428 aa17.11■□□□□ 0.33
PALB2-205ENST00000567003 LAMTOR5O43504 91 aa17.11■□□□□ 0.33
PALB2-205ENST00000567003 THP07101 528 aa17.11■□□□□ 0.33
PALB2-205ENST00000567003 FDPSP14324 419 aaKnown RBP17.11■□□□□ 0.33
PALB2-205ENST00000567003 TARSP26639 723 aaKnown RBP17.11■□□□□ 0.33
PALB2-205ENST00000567003 HOXA9P31269 272 aa17.11■□□□□ 0.33
PALB2-205ENST00000567003 PRKCQQ04759 706 aa17.11■□□□□ 0.33
PALB2-205ENST00000567003 PABPC1LQ4VXU2 614 aaKnown RBP17.11■□□□□ 0.33
PALB2-205ENST00000567003 TPRG1Q6ZUI0 275 aa17.11■□□□□ 0.33
PALB2-205ENST00000567003 NECAB1Q8N987 351 aa17.11■□□□□ 0.33
PALB2-205ENST00000567003 TMEM60Q9H2L4 133 aa17.11■□□□□ 0.33
PALB2-205ENST00000567003 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
PALB2-205ENST00000567003 NCDNQ9UBB6 729 aa17.11■□□□□ 0.33
PALB2-205ENST00000567003 N4BP3O15049 544 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 NEMFO60524 1076 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 MED24O75448 989 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 PRKCBP05771 671 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 SPATA31C1P0DKV0 1188 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 PRPF4BQ13523 1007 aaKnown RBP17.1■□□□□ 0.33
PALB2-205ENST00000567003 RAB33AQ14088 237 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 SLC5A9Q2M3M2 681 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 ZBTB8OSQ8IWT0 167 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 MCRS1Q96EZ8 462 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 PRIMPOLQ96LW4 560 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 KIFC3Q9BVG8 833 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 GOLGA2P5Q9HBQ8 144 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 CDY1Q9Y6F8 540 aa17.1■□□□□ 0.33
PALB2-205ENST00000567003 BTBD18B2RXH4 712 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 LARGE1O95461 756 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 CEBPBP17676 345 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 ATP2B1P20020 1258 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 FGFR3P22607 806 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 TKTP29401 623 aaKnown RBP17.09■□□□□ 0.33
PALB2-205ENST00000567003 FAM187BQ17R55 369 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 ZNF528Q3MIS6 628 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms